F0NYV3 (F0NYV3_WEEVC) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 13.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Superoxide dismutase RuleBase RU000414 EC=1.15.1.1 RuleBase RU000414 | ||
| Gene names |
| ||
| Organism | Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) [Complete proteome] [HAMAP] EMBL ADX67155.1 | ||
| Taxonomic identifier | 865938 [NCBI] | ||
| Taxonomic lineage | Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Weeksella › ![]() |
Protein attributes
| Sequence length | 261 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414 |
| Catalytic activity | 2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414 |
Ontologies
| Keywords | |
|---|---|
| Domain | Signal EMBL ADX67155.1 |
| Molecular function | Oxidoreductase RuleBase RU000414 EMBL ADX67155.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | superoxide metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular_function | metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 20 | 20 | Potential EMBL ADX67155.1 | |||||
| Chain | 21 – 261 | 241 | Potential EMBL ADX67155.1 | PRO_5000715019 | ||||
Sequences
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References
| [1] | "Complete genome sequence of Weeksella virosa type strain (9751T)." Lang E., Teshima H., Lucas S., Lapidus A., Hammon N., Deshpande S., Nolan M., Cheng J., Pitluck S., Liolios K., Pagani I., Mikhailova N., Ivanova N., Mavromatis K., Pati A., Tapia R., Han C., Goodwin L. Kyrpides N.Stand. Genomic Sci. 4:81-90(2011) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP002455 Genomic DNA. Translation: ADX67155.1. |
| RefSeq | YP_004237733.1. NC_015144.1. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADX67155; ADX67155; Weevi_0436. |
| GeneID | 10281637. |
| KEGG | wvi:Weevi_0436. |
| PATRIC | 47058175. VBIWeeVir165365_0438. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| KO | K04564. |
Family and domain databases | |
| InterPro | IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view] |
| PANTHER | PTHR11404. PTHR11404. 1 hit. |
| Pfam | PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view] |
| PIRSF | PIRSF000349. SODismutase. 1 hit. |
| PRINTS | PR01703. MNSODISMTASE. |
| SUPFAM | SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit. |
| PROSITE | PS00088. SOD_MN. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | F0NYV3_WEEVC | ||||||||
| Accession | Primary (citable) accession number: F0NYV3 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
