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Protein
Submitted name:

DNA ligase

Gene

NMBNZ0533_1980

Organism
Neisseria meningitidis serogroup B (strain NZ-05/33)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciNMEN935589:GLHU-1979-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:NMBNZ0533_1980Imported
OrganismiNeisseria meningitidis serogroup B (strain NZ-05/33)Imported
Taxonomic identifieri935589 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
ProteomesiUP000007482: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF0NB33.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK10747.
OMAiVRGYWDG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0NB33-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFLNGFSDGI GFAVCFMAVC RLFGYWGNQM IKKTIGGIIP IFTAVFIPAS
60 70 80 90 100
AGAADLMLAQ EYKDQEIAGW AMSEKLDGVR AYWDGKHLIS RQGYAFTPPK
110 120 130 140 150
GFTAQFPPYP LDGELYSGRG QFEQISATVR SVSSDWRGIR LHVFDVPKAQ
160 170 180 190 200
GNLYQRLAVA TQWLKTHPNA PITIIPQTKV RDRQHAMDFL KQIEAQGGEG
210 220 230 240 250
VMLRQPESRY SGGRSSQLLK LKSQYDDECT VTRHYEGKGR NAGRLGAVGC
260 270 280 290 300
KNRHGEFRIG SGFKDKDRDN PPKIGTLITY RYRGFTRKGT PKFATFVRVR

TDR
Length:303
Mass (Da):34,019
Last modified:May 3, 2011 - v1
Checksum:i3CA2C39C021F983B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002424 Genomic DNA. Translation: ADZ04351.1.
RefSeqiWP_002224159.1. NC_017518.1.
YP_005904522.1. NC_017518.1.

Genome annotation databases

EnsemblBacteriaiADZ04351; ADZ04351; NMBNZ0533_1980.
GeneIDi12495336.
KEGGinmz:NMBNZ0533_1980.
PATRICi47177489. VBINeiMen179262_2645.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002424 Genomic DNA. Translation: ADZ04351.1.
RefSeqiWP_002224159.1. NC_017518.1.
YP_005904522.1. NC_017518.1.

3D structure databases

ProteinModelPortaliF0NB33.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ04351; ADZ04351; NMBNZ0533_1980.
GeneIDi12495336.
KEGGinmz:NMBNZ0533_1980.
PATRICi47177489. VBINeiMen179262_2645.

Phylogenomic databases

KOiK10747.
OMAiVRGYWDG.

Enzyme and pathway databases

BioCyciNMEN935589:GLHU-1979-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination."
    Budroni S., Siena E., Hotopp J.C., Seib K.L., Serruto D., Nofroni C., Comanducci M., Riley D.R., Daugherty S.C., Angiuoli S.V., Covacci A., Pizza M., Rappuoli R., Moxon E.R., Tettelin H., Medini D.
    Proc. Natl. Acad. Sci. U.S.A. 108:4494-4499(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NZ-05/33Imported.

Entry informationi

Entry nameiF0NB33_NEIMN
AccessioniPrimary (citable) accession number: F0NB33
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: March 4, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.