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F0N717 (F0N717_NEIMN) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribulose-phosphate 3-epimerase PIRNR PIRNR001461
EC=5.1.3.1 PIRNR PIRNR001461
Gene names
Name:rpe EMBL ADZ03636.1
Ordered Locus Names:NMBNZ0533_1210 EMBL ADZ03636.1
OrganismNeisseria meningitidis serogroup B (strain NZ-05/33) [Complete proteome] [HAMAP]
Taxonomic identifier935589 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Neisseriales › Neisseriaceae › Neisseria ›

Protein attributes

Sequence length242 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-ribulose 5-phosphate = D-xylulose 5-phosphate. PIRNR PIRNR001461

Cofactor

Binds 1 divalent metal cation per subunit. Active with Co2+, Mn2+ and Zn2+ By similarity. PIRSR PIRSR001461-2

Sequence similarities

Belongs to the ribulose-phosphate 3-epimerase family. PIRNR PIRNR001461

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region143 – 1464Substrate binding By similarity PIRSR PIRSR001461-3
Region202 – 2032Substrate binding By similarity PIRSR PIRSR001461-3

Sites

Active site361Proton acceptor By similarity PIRSR PIRSR001461-1
Active site1801Proton donor By similarity PIRSR PIRSR001461-1
Metal binding341Divalent metal cation By similarity PIRSR PIRSR001461-2
Metal binding361Divalent metal cation By similarity PIRSR PIRSR001461-2
Metal binding671Divalent metal cation By similarity PIRSR PIRSR001461-2
Metal binding1801Divalent metal cation By similarity PIRSR PIRSR001461-2
Binding site91Substrate By similarity PIRSR PIRSR001461-3
Binding site671Substrate By similarity PIRSR PIRSR001461-3
Binding site1821Substrate; via amide nitrogen By similarity PIRSR PIRSR001461-3

Sequences

Sequence LengthMass (Da)Tools
F0N717 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: AD37D414E37B037C

FASTA24226,289
        10         20         30         40         50         60 
MTTYRIAPSI LSADFARLGE EVESVIAAGA DLIHFDVMDN HYVPNLTFGP MVCAALKPYA 

        70         80         90        100        110        120 
SVPIDVHLMV EPVDDLIQSF AKAGASIITF HPEASRHIDR SLSLIRDMGC QAGLVLNPAT 

       130        140        150        160        170        180 
PVYLLENVLD RLDMVLLMSV NPGFGGQSFI PHTLEKIRRV RAMLDRYEAQ SGRHIAIEVD 

       190        200        210        220        230        240 
GGIKTDNIAA VARAGADTFV AGSAIFGKPD YKAVIDAMRA ELEKSGRLNL APMIEIEMPS 


EN

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References

[1]"Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination."
Budroni S., Siena E., Dunning Hotopp J., Seib K.L., Serruto D., Nofroni C., Comanducci M., Riley D.R., Daugherty S.C., Angiuoli S., Covacci A., Pizza M., Rappuoli R., Moxon E., Tettelin H., Medini D.
Proc. Natl. Acad. Sci. U.S.A. 108:4494-4499(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NZ-05/33 EMBL ADZ03636.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002424 Genomic DNA. Translation: ADZ03636.1.
RefSeqYP_005903807.1. NC_017518.1.

3D structure databases

ProteinModelPortalF0N717.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ03636; ADZ03636; NMBNZ0533_1210.
GeneID12494561.
KEGGnmz:NMBNZ0533_1210.
PATRIC47175207. VBINeiMen179262_1560.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01783.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
InterProIPR013785. Aldolase_TIM.
IPR026019. Ribul_P_3_epim.
IPR000056. Ribul_P_3_epim-like.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
PANTHERPTHR11749. PTHR11749. 1 hit.
PfamPF00834. Ribul_P_3_epim. 1 hit.
[Graphical view]
PIRSFPIRSF001461. RPE. 1 hit.
SUPFAMSSF51366. RibP_bind_barrel. 1 hit.
TIGRFAMsTIGR01163. rpe. 1 hit.
PROSITEPS01085. RIBUL_P_3_EPIMER_1. 1 hit.
PS01086. RIBUL_P_3_EPIMER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0N717_NEIMN
AccessionPrimary (citable) accession number: F0N717
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info