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F0MVR8 (F0MVR8_NEIMP) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA ligase EMBL ADZ00451.1
EC=6.5.1.1 EMBL ADZ00451.1
Gene names
Ordered Locus Names:NMBM01240355_1983 EMBL ADZ00451.1
OrganismNeisseria meningitidis serogroup B (strain M01-240355) [Complete proteome] [HAMAP]
Taxonomic identifier935588 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Neisseriales › Neisseriaceae › Neisseria ›

Protein attributes

Sequence length274 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADZ00451.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F0MVR8 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 9385879B87560B15

FASTA27430,709
        10         20         30         40         50         60 
MIKKTIGGII PIFTAVFIPA SAGAADLMLA QEYKGQDIAG WAMSEKLDGV RAYWDGKHLV 

        70         80         90        100        110        120 
SRQGYVFTPP KGFTAQFPPY PLDGELYSGR GQFEQISATV RSASSDWRGI RLHVFDVPKA 

       130        140        150        160        170        180 
QGNLYQRLAV ATQWLKTHPN APITIIPQIK VRDRQHAMDF LKQIEAQGGE GVMLRQPESR 

       190        200        210        220        230        240 
YSGGRSSQLL KLKSQYDDEC TVTRHYEGKG RNAGRLGAVG CKNRYGEFRI GSGFKDKDRD 

       250        260        270 
NPPKIGTLIT YRYRGFTQKG TPKFATFVRV RTDR

« Hide

References

[1]"Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination."
Budroni S., Siena E., Dunning Hotopp J., Seib K.L., Serruto D., Nofroni C., Comanducci M., Riley D.R., Daugherty S.C., Angiuoli S., Covacci A., Pizza M., Rappuoli R., Moxon E., Tettelin H., Medini D.
Proc. Natl. Acad. Sci. U.S.A. 108:4494-4499(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M01-240355 EMBL ADZ00451.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002422 Genomic DNA. Translation: ADZ00451.1.
RefSeqYP_005902569.1. NC_017517.1.

3D structure databases

ProteinModelPortalF0MVR8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ00451; ADZ00451; NMBM01240355_1983.
GeneID12493245.
KEGGnms:NMBM01240355_1983.
PATRIC47165761. VBINeiMen181352_2715.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0MVR8_NEIMP
AccessionPrimary (citable) accession number: F0MVR8
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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