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Protein
Submitted name:

DNA ligase

Gene

NMBG2136_1949

Organism
Neisseria meningitidis serogroup B (strain G2136)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:NMBG2136_1949Imported
OrganismiNeisseria meningitidis serogroup B (strain G2136)Imported
Taxonomic identifieri935599 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
ProteomesiUP000007479: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK10747.
OMAiVRGYWDG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0MGJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKKTIGGII PIFTAVFIPA SAGAADLMLA QEYKGQEIAG WAMSEKLDGV
60 70 80 90 100
RAYWDGKHLV SRQGYVFTPP KGFTAQFPPY PLDGELYSGR GQFEQISATV
110 120 130 140 150
RSASSDWRGI RLHVFDVPKA QGNLYQRLAV ATQWLKTHPN APITIIPQIK
160 170 180 190 200
VRDRQHAMDF LKQIEAQGGE GVMLRQPESR YSGGRSSQLL KLKSQYDDEC
210 220 230 240 250
TVTRHYEGKG RNAGRLGAVG CKNRYGEFRI GSGFKDKDRD NPPKIGTLIT
260 270
YRYRGFTQKG TPKFATFVRV RTDR
Length:274
Mass (Da):30,723
Last modified:May 3, 2011 - v1
Checksum:i32425CF6318D36B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002419 Genomic DNA. Translation: ADY94595.1.
RefSeqiYP_005894767.1. NC_017513.1.

Genome annotation databases

EnsemblBacteriaiADY94595; ADY94595; NMBG2136_1949.
GeneIDi12411588.
KEGGinmd:NMBG2136_1949.
PATRICi47148087. VBINeiMen175532_2623.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002419 Genomic DNA. Translation: ADY94595.1.
RefSeqiYP_005894767.1. NC_017513.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADY94595; ADY94595; NMBG2136_1949.
GeneIDi12411588.
KEGGinmd:NMBG2136_1949.
PATRICi47148087. VBINeiMen175532_2623.

Phylogenomic databases

KOiK10747.
OMAiVRGYWDG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination."
    Budroni S., Siena E., Hotopp J.C., Seib K.L., Serruto D., Nofroni C., Comanducci M., Riley D.R., Daugherty S.C., Angiuoli S.V., Covacci A., Pizza M., Rappuoli R., Moxon E.R., Tettelin H., Medini D.
    Proc. Natl. Acad. Sci. U.S.A. 108:4494-4499(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: G2136Imported.

Entry informationi

Entry nameiF0MGJ2_NEIMG
AccessioniPrimary (citable) accession number: F0MGJ2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: March 4, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.