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F0M9G3 (F0M9G3_ARTPP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP-dependent DNA ligase LigD polymerase moduleATP-dependent DNA ligase LigD ligase moduleATP-dependent DNA ligase LigD phosphoesterase module EMBL ADX71640.1
Gene names
Ordered Locus Names:Asphe3_04250 EMBL ADX71640.1
OrganismArthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) [Complete proteome] [HAMAP] EMBL ADX71640.1
Taxonomic identifier930171 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter ›

Protein attributes

Sequence length842 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F0M9G3 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: A785E9F54FE2BEB7

FASTA84292,234
        10         20         30         40         50         60 
MTLTNLDKVI YPETGTTKAD VLAYYAAVGH VLIPAAANRP ATRKRWVNGV GTADKPGEVF 

        70         80         90        100        110        120 
FQKNLEDSAP GWLPRAAITH KDRTIYYPMV NDPATLAWFG QINSLEIHVP QWQVDSHGNQ 

       130        140        150        160        170        180 
LNPDRLVLDL DPGEGAGIEE CVEVALLARS ILEDVGLDPV PVTSGSKGIH LYAALDRSQT 

       190        200        210        220        230        240 
SDQISAFARE LARALESDHP DLAVSDMKKT LRKGKVLVDW SQNNAAKTTI VPYSLRGRPT 

       250        260        270        280        290        300 
PMVAAPRTWE EIGSPGLTHL DYHEVMRRVR EGIDPFAAVV RASGHSADDV AAHREDSHDG 

       310        320        330        340        350        360 
NPRLAKYRSM RDPQATPEPF SGAAGSGDAF VIQEHHASRL HFDLRLEHEG VLVSWALPKG 

       370        380        390        400        410        420 
VPESSGKNHL AVQTEDHPMD YLTFQGTIPK GEYGAGEMTI WDHGTYDLHK WINGKEVIVT 

       430        440        450        460        470        480 
LKGSEGGGLG GTRKFALIHT GRGQGKESEG QWLIHLMDPE HRGGRRRHAS PRGEQEEAGQ 

       490        500        510        520        530        540 
PEAAGEPLQD EAPKNPVTTK TAPAKTATTA DDSSAVAAAG AAPSPEDYRP MMATSGDAAD 

       550        560        570        580        590        600 
LQGSNWQFEL KWDGVRAIVL GDGGAVRIFS RNGIDVSRTY PEFTDRSCWP ERPFVADGEI 

       610        620        630        640        650        660 
VAVGPAGRPD FGLLQGRMKL TRPADVERAR KAIPVQLMLF DLLHDDGTDL RRLPLAKRRQ 

       670        680        690        700        710        720 
RLEDFFTPAG CPAQLSPVLE EQVEDILDSA RELGLEGVMA KRTDSRYVSG QRTRTWIKLK 

       730        740        750        760        770        780 
VEQTQEVVVG GWRPGKGGRE DTVGSLLVGI PDGKKLQYAG RVGSGFSGRE LAELRQTVDR 

       790        800        810        820        830        840 
LARKTSPFLD VPRPDAADAH WVAPELVGEV TYSEWTGTGR LRHPVWRGWR LDKDPAEVVR 


EG

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002379 Genomic DNA. Translation: ADX71640.1.
RefSeqYP_004239774.1. NC_015145.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADX71640; ADX71640; Asphe3_04250.
GeneID10283800.
KEGGapn:Asphe3_04250.
PATRIC46859157. VBIArtPhe178037_0429.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycAPHE930171:GJHZ-425-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0M9G3_ARTPP
AccessionPrimary (citable) accession number: F0M9G3
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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