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F0M9G3

- F0M9G3_ARTPP

UniProt

F0M9G3 - F0M9G3_ARTPP

Protein
Submitted name:

ATP-dependent DNA ligase LigD polymerase moduleATP-dependent DNA ligase LigD ligase moduleATP-dependent DNA ligase LigD phosphoesterase module

Gene

Asphe3_04250

Organism
Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciAPHE930171:GJHZ-425-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase LigD polymerase moduleATP-dependent DNA ligase LigD ligase moduleATP-dependent DNA ligase LigD phosphoesterase moduleImported
    Gene namesi
    Ordered Locus Names:Asphe3_04250Imported
    OrganismiArthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)Imported
    Taxonomic identifieri930171 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter
    ProteomesiUP000008639: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F0M9G3-1 [UniParc]FASTAAdd to Basket

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    MTLTNLDKVI YPETGTTKAD VLAYYAAVGH VLIPAAANRP ATRKRWVNGV    50
    GTADKPGEVF FQKNLEDSAP GWLPRAAITH KDRTIYYPMV NDPATLAWFG 100
    QINSLEIHVP QWQVDSHGNQ LNPDRLVLDL DPGEGAGIEE CVEVALLARS 150
    ILEDVGLDPV PVTSGSKGIH LYAALDRSQT SDQISAFARE LARALESDHP 200
    DLAVSDMKKT LRKGKVLVDW SQNNAAKTTI VPYSLRGRPT PMVAAPRTWE 250
    EIGSPGLTHL DYHEVMRRVR EGIDPFAAVV RASGHSADDV AAHREDSHDG 300
    NPRLAKYRSM RDPQATPEPF SGAAGSGDAF VIQEHHASRL HFDLRLEHEG 350
    VLVSWALPKG VPESSGKNHL AVQTEDHPMD YLTFQGTIPK GEYGAGEMTI 400
    WDHGTYDLHK WINGKEVIVT LKGSEGGGLG GTRKFALIHT GRGQGKESEG 450
    QWLIHLMDPE HRGGRRRHAS PRGEQEEAGQ PEAAGEPLQD EAPKNPVTTK 500
    TAPAKTATTA DDSSAVAAAG AAPSPEDYRP MMATSGDAAD LQGSNWQFEL 550
    KWDGVRAIVL GDGGAVRIFS RNGIDVSRTY PEFTDRSCWP ERPFVADGEI 600
    VAVGPAGRPD FGLLQGRMKL TRPADVERAR KAIPVQLMLF DLLHDDGTDL 650
    RRLPLAKRRQ RLEDFFTPAG CPAQLSPVLE EQVEDILDSA RELGLEGVMA 700
    KRTDSRYVSG QRTRTWIKLK VEQTQEVVVG GWRPGKGGRE DTVGSLLVGI 750
    PDGKKLQYAG RVGSGFSGRE LAELRQTVDR LARKTSPFLD VPRPDAADAH 800
    WVAPELVGEV TYSEWTGTGR LRHPVWRGWR LDKDPAEVVR EG 842
    Length:842
    Mass (Da):92,234
    Last modified:May 3, 2011 - v1
    Checksum:iA785E9F54FE2BEB7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002379 Genomic DNA. Translation: ADX71640.1.
    RefSeqiWP_013599582.1. NC_015145.1.
    YP_004239774.1. NC_015145.1.

    Genome annotation databases

    EnsemblBacteriaiADX71640; ADX71640; Asphe3_04250.
    GeneIDi10283800.
    KEGGiapn:Asphe3_04250.
    PATRICi46859157. VBIArtPhe178037_0429.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002379 Genomic DNA. Translation: ADX71640.1 .
    RefSeqi WP_013599582.1. NC_015145.1.
    YP_004239774.1. NC_015145.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADX71640 ; ADX71640 ; Asphe3_04250 .
    GeneIDi 10283800.
    KEGGi apn:Asphe3_04250.
    PATRICi 46859157. VBIArtPhe178037_0429.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci APHE930171:GJHZ-425-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 18606 / JCM 16027 / LMG 23796 / Sphe3Imported.

    Entry informationi

    Entry nameiF0M9G3_ARTPP
    AccessioniPrimary (citable) accession number: F0M9G3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3