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F0M9G3

- F0M9G3_ARTPP

UniProt

F0M9G3 - F0M9G3_ARTPP

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Protein
Submitted name:

ATP-dependent DNA ligase LigD polymerase moduleATP-dependent DNA ligase LigD ligase moduleATP-dependent DNA ligase LigD phosphoesterase module

Gene
Asphe3_04250
Organism
Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAPHE930171:GJHZ-425-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigD polymerase moduleATP-dependent DNA ligase LigD ligase moduleATP-dependent DNA ligase LigD phosphoesterase moduleImported
Gene namesi
Ordered Locus Names:Asphe3_04250Imported
OrganismiArthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)Imported
Taxonomic identifieri930171 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter
ProteomesiUP000008639: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0M9G3-1 [UniParc]FASTAAdd to Basket

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MTLTNLDKVI YPETGTTKAD VLAYYAAVGH VLIPAAANRP ATRKRWVNGV    50
GTADKPGEVF FQKNLEDSAP GWLPRAAITH KDRTIYYPMV NDPATLAWFG 100
QINSLEIHVP QWQVDSHGNQ LNPDRLVLDL DPGEGAGIEE CVEVALLARS 150
ILEDVGLDPV PVTSGSKGIH LYAALDRSQT SDQISAFARE LARALESDHP 200
DLAVSDMKKT LRKGKVLVDW SQNNAAKTTI VPYSLRGRPT PMVAAPRTWE 250
EIGSPGLTHL DYHEVMRRVR EGIDPFAAVV RASGHSADDV AAHREDSHDG 300
NPRLAKYRSM RDPQATPEPF SGAAGSGDAF VIQEHHASRL HFDLRLEHEG 350
VLVSWALPKG VPESSGKNHL AVQTEDHPMD YLTFQGTIPK GEYGAGEMTI 400
WDHGTYDLHK WINGKEVIVT LKGSEGGGLG GTRKFALIHT GRGQGKESEG 450
QWLIHLMDPE HRGGRRRHAS PRGEQEEAGQ PEAAGEPLQD EAPKNPVTTK 500
TAPAKTATTA DDSSAVAAAG AAPSPEDYRP MMATSGDAAD LQGSNWQFEL 550
KWDGVRAIVL GDGGAVRIFS RNGIDVSRTY PEFTDRSCWP ERPFVADGEI 600
VAVGPAGRPD FGLLQGRMKL TRPADVERAR KAIPVQLMLF DLLHDDGTDL 650
RRLPLAKRRQ RLEDFFTPAG CPAQLSPVLE EQVEDILDSA RELGLEGVMA 700
KRTDSRYVSG QRTRTWIKLK VEQTQEVVVG GWRPGKGGRE DTVGSLLVGI 750
PDGKKLQYAG RVGSGFSGRE LAELRQTVDR LARKTSPFLD VPRPDAADAH 800
WVAPELVGEV TYSEWTGTGR LRHPVWRGWR LDKDPAEVVR EG 842
Length:842
Mass (Da):92,234
Last modified:May 3, 2011 - v1
Checksum:iA785E9F54FE2BEB7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002379 Genomic DNA. Translation: ADX71640.1.
RefSeqiWP_013599582.1. NC_015145.1.
YP_004239774.1. NC_015145.1.

Genome annotation databases

EnsemblBacteriaiADX71640; ADX71640; Asphe3_04250.
GeneIDi10283800.
KEGGiapn:Asphe3_04250.
PATRICi46859157. VBIArtPhe178037_0429.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002379 Genomic DNA. Translation: ADX71640.1 .
RefSeqi WP_013599582.1. NC_015145.1.
YP_004239774.1. NC_015145.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADX71640 ; ADX71640 ; Asphe3_04250 .
GeneIDi 10283800.
KEGGi apn:Asphe3_04250.
PATRICi 46859157. VBIArtPhe178037_0429.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci APHE930171:GJHZ-425-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 18606 / JCM 16027 / LMG 23796 / Sphe3.

Entry informationi

Entry nameiF0M9G3_ARTPP
AccessioniPrimary (citable) accession number: F0M9G3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: September 3, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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