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F0M9C5

- F0M9C5_ARTPP

UniProt

F0M9C5 - F0M9C5_ARTPP

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Asphe3_38910

Organism
Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciAPHE930171:GJHZ-3878-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Asphe3_38910Imported
    OrganismiArthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)Imported
    Taxonomic identifieri930171 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter
    ProteomesiUP000008639: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF0M9C5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F0M9C5-1 [UniParc]FASTAAdd to Basket

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    MELPVMPPVP PMLAKAVSGI PEGDLSYEPK WDGFRSIIFR DGDDVEIGSR    50
    NEKPMTRYFP ELVEALKENL PPRCVVDGEI VLIGPSGDRL DFDALQQRIH 100
    PAASRVRLLA EQTPASFVAF DLLALGDDSY MDRPFTERRA ALEKALAASK 150
    APVHLTAATT DKDTAQRWFE QFEGAGLDGV VAKRLEGRYE PDKRVMFKTK 200
    HERTADCVVA GYRLHKSGPD AIGSLLLGLY KDDGGLASVG VIGAFPMKRR 250
    RELYEQLQQL VTDFDNHPWA WAKQEEGERT PRNAEGSRWS AGKDLSFVPL 300
    RPELVVEVRY DHMEGDRFRH TAQFNRWRPD RDPESCTYAQ LEEPVSFDLV 350
    SVLETGRP 358
    Length:358
    Mass (Da):40,324
    Last modified:May 3, 2011 - v1
    Checksum:i4A801561331DF9D8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002379 Genomic DNA. Translation: ADX74979.1.
    RefSeqiYP_004243113.1. NC_015145.1.

    Genome annotation databases

    EnsemblBacteriaiADX74979; ADX74979; Asphe3_38910.
    GeneIDi10287253.
    KEGGiapn:Asphe3_38910.
    PATRICi46866223. VBIArtPhe178037_3880.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002379 Genomic DNA. Translation: ADX74979.1 .
    RefSeqi YP_004243113.1. NC_015145.1.

    3D structure databases

    ProteinModelPortali F0M9C5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADX74979 ; ADX74979 ; Asphe3_38910 .
    GeneIDi 10287253.
    KEGGi apn:Asphe3_38910.
    PATRICi 46866223. VBIArtPhe178037_3880.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci APHE930171:GJHZ-3878-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 18606 / JCM 16027 / LMG 23796 / Sphe3Imported.

    Entry informationi

    Entry nameiF0M9C5_ARTPP
    AccessioniPrimary (citable) accession number: F0M9C5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3