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F0M9C5

- F0M9C5_ARTPP

UniProt

F0M9C5 - F0M9C5_ARTPP

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
Asphe3_38910
Organism
Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAPHE930171:GJHZ-3878-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Asphe3_38910Imported
OrganismiArthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3)Imported
Taxonomic identifieri930171 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter
ProteomesiUP000008639: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF0M9C5.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0M9C5-1 [UniParc]FASTAAdd to Basket

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MELPVMPPVP PMLAKAVSGI PEGDLSYEPK WDGFRSIIFR DGDDVEIGSR    50
NEKPMTRYFP ELVEALKENL PPRCVVDGEI VLIGPSGDRL DFDALQQRIH 100
PAASRVRLLA EQTPASFVAF DLLALGDDSY MDRPFTERRA ALEKALAASK 150
APVHLTAATT DKDTAQRWFE QFEGAGLDGV VAKRLEGRYE PDKRVMFKTK 200
HERTADCVVA GYRLHKSGPD AIGSLLLGLY KDDGGLASVG VIGAFPMKRR 250
RELYEQLQQL VTDFDNHPWA WAKQEEGERT PRNAEGSRWS AGKDLSFVPL 300
RPELVVEVRY DHMEGDRFRH TAQFNRWRPD RDPESCTYAQ LEEPVSFDLV 350
SVLETGRP 358
Length:358
Mass (Da):40,324
Last modified:May 3, 2011 - v1
Checksum:i4A801561331DF9D8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002379 Genomic DNA. Translation: ADX74979.1.
RefSeqiYP_004243113.1. NC_015145.1.

Genome annotation databases

EnsemblBacteriaiADX74979; ADX74979; Asphe3_38910.
GeneIDi10287253.
KEGGiapn:Asphe3_38910.
PATRICi46866223. VBIArtPhe178037_3880.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002379 Genomic DNA. Translation: ADX74979.1 .
RefSeqi YP_004243113.1. NC_015145.1.

3D structure databases

ProteinModelPortali F0M9C5.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADX74979 ; ADX74979 ; Asphe3_38910 .
GeneIDi 10287253.
KEGGi apn:Asphe3_38910.
PATRICi 46866223. VBIArtPhe178037_3880.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci APHE930171:GJHZ-3878-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 18606 / JCM 16027 / LMG 23796 / Sphe3.

Entry informationi

Entry nameiF0M9C5_ARTPP
AccessioniPrimary (citable) accession number: F0M9C5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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