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Protein

Alpha-amylase

Gene

vfu_B00689

Organism
Vibrio furnissii (strain DSM 14383 / NCTC 11218)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciVFUR903510:GHFS-3782-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:vfu_B00689Imported
OrganismiVibrio furnissii (strain DSM 14383 / NCTC 11218)Imported
Taxonomic identifieri903510 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000007456 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi903510.vfu_B00689.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.
OMAiNEWLAYA.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F0LYB1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MISSHPTDVI LHAFDWPYSL IAERAETIEQ AGYKAVLVSP PMKSYQHPSG
60 70 80 90 100
TPWWQRYQPQ DYRVIDNQLG DTQDFIRMVD ALRARDLWVY ADVVFNHMAN
110 120 130 140 150
ESKQRLDLQY PSDADMAAYR QRPDYYQKQC LFGDLSQPLF EEDDFVEAFG
160 170 180 190 200
INDWKDKWQV QNGRITGGPH DQGLPTLRDN DHVVAQQQNY LVALKKLGVK
210 220 230 240 250
GFRIDAAKHM TIAHLKKVWT DAIAHDVHIF GEIITDGGAT KEEYQLFLQP
260 270 280 290 300
YLAETRLGAY DFPLFQTLFN ALQPSGSLKG LIDPYCFGDA LSKERAITFA
310 320 330 340 350
ITHDIPNNDV FANLVMSPER EALAYSYVLG RDGGVPLIYT DLDPSGIRNA
360 370 380 390 400
QGEPRWQQSW HEAHMVARIA FHNRMHGLPM VNLEANDDLL VFCRGEQGVV
410 420 430 440 450
IINKSSRNQT VELNWPQALT DVLSDDVFAS NGTHVQIDTA PMTSRMLWVA

PDAQTKK
Length:457
Mass (Da):51,954
Last modified:May 3, 2011 - v1
Checksum:iE06519DAA04E480D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002378 Genomic DNA. Translation: ADT88910.1.
RefSeqiWP_014257654.1. NC_016628.1.

Genome annotation databases

EnsemblBacteriaiADT88910; ADT88910; vfu_B00689.
KEGGivfu:vfu_B00689.
PATRICi45431909. VBIVibFur169925_3723.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002378 Genomic DNA. Translation: ADT88910.1.
RefSeqiWP_014257654.1. NC_016628.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi903510.vfu_B00689.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADT88910; ADT88910; vfu_B00689.
KEGGivfu:vfu_B00689.
PATRICi45431909. VBIVibFur169925_3723.

Phylogenomic databases

KOiK01176.
OMAiNEWLAYA.

Enzyme and pathway databases

BioCyciVFUR903510:GHFS-3782-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of a free-living Vibrio furnissii sp. nov. strain (NCTC 11218)."
    Lux T.M., Lee R., Love J.
    J. Bacteriol. 193:1487-1488(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14383 / NCTC 11218Imported.

Entry informationi

Entry nameiF0LYB1_VIBFN
AccessioniPrimary (citable) accession number: F0LYB1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: July 22, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.