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F0LYB1

- F0LYB1_VIBFN

UniProt

F0LYB1 - F0LYB1_VIBFN

Protein

Alpha-amylase

Gene

vfu_B00689

Organism
Vibrio furnissii (strain DSM 14383 / NCTC 11218)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciVFUR903510:GHFS-3782-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:vfu_B00689Imported
    OrganismiVibrio furnissii (strain DSM 14383 / NCTC 11218)Imported
    Taxonomic identifieri903510 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000007456: Chromosome 2

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F0LYB1-1 [UniParc]FASTAAdd to Basket

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    MISSHPTDVI LHAFDWPYSL IAERAETIEQ AGYKAVLVSP PMKSYQHPSG    50
    TPWWQRYQPQ DYRVIDNQLG DTQDFIRMVD ALRARDLWVY ADVVFNHMAN 100
    ESKQRLDLQY PSDADMAAYR QRPDYYQKQC LFGDLSQPLF EEDDFVEAFG 150
    INDWKDKWQV QNGRITGGPH DQGLPTLRDN DHVVAQQQNY LVALKKLGVK 200
    GFRIDAAKHM TIAHLKKVWT DAIAHDVHIF GEIITDGGAT KEEYQLFLQP 250
    YLAETRLGAY DFPLFQTLFN ALQPSGSLKG LIDPYCFGDA LSKERAITFA 300
    ITHDIPNNDV FANLVMSPER EALAYSYVLG RDGGVPLIYT DLDPSGIRNA 350
    QGEPRWQQSW HEAHMVARIA FHNRMHGLPM VNLEANDDLL VFCRGEQGVV 400
    IINKSSRNQT VELNWPQALT DVLSDDVFAS NGTHVQIDTA PMTSRMLWVA 450
    PDAQTKK 457
    Length:457
    Mass (Da):51,954
    Last modified:May 3, 2011 - v1
    Checksum:iE06519DAA04E480D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002378 Genomic DNA. Translation: ADT88910.1.
    RefSeqiYP_005049230.1. NC_016628.1.

    Genome annotation databases

    EnsemblBacteriaiADT88910; ADT88910; vfu_B00689.
    GeneIDi11564920.
    KEGGivfu:vfu_B00689.
    PATRICi45431909. VBIVibFur169925_3723.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002378 Genomic DNA. Translation: ADT88910.1 .
    RefSeqi YP_005049230.1. NC_016628.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADT88910 ; ADT88910 ; vfu_B00689 .
    GeneIDi 11564920.
    KEGGi vfu:vfu_B00689.
    PATRICi 45431909. VBIVibFur169925_3723.

    Phylogenomic databases

    KOi K01176.

    Enzyme and pathway databases

    BioCyci VFUR903510:GHFS-3782-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of a free-living Vibrio furnissii sp. nov. strain (NCTC 11218)."
      Lux T.M., Lee R., Love J.
      J. Bacteriol. 193:1487-1488(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 14383 / NCTC 11218Imported.

    Entry informationi

    Entry nameiF0LYB1_VIBFN
    AccessioniPrimary (citable) accession number: F0LYB1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3