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F0LYB1

- F0LYB1_VIBFN

UniProt

F0LYB1 - F0LYB1_VIBFN

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Protein

Alpha-amylase

Gene

vfu_B00689

Organism
Vibrio furnissii (strain DSM 14383 / NCTC 11218)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciVFUR903510:GHFS-3782-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:vfu_B00689Imported
OrganismiVibrio furnissii (strain DSM 14383 / NCTC 11218)Imported
Taxonomic identifieri903510 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000007456: Chromosome 2

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F0LYB1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MISSHPTDVI LHAFDWPYSL IAERAETIEQ AGYKAVLVSP PMKSYQHPSG
60 70 80 90 100
TPWWQRYQPQ DYRVIDNQLG DTQDFIRMVD ALRARDLWVY ADVVFNHMAN
110 120 130 140 150
ESKQRLDLQY PSDADMAAYR QRPDYYQKQC LFGDLSQPLF EEDDFVEAFG
160 170 180 190 200
INDWKDKWQV QNGRITGGPH DQGLPTLRDN DHVVAQQQNY LVALKKLGVK
210 220 230 240 250
GFRIDAAKHM TIAHLKKVWT DAIAHDVHIF GEIITDGGAT KEEYQLFLQP
260 270 280 290 300
YLAETRLGAY DFPLFQTLFN ALQPSGSLKG LIDPYCFGDA LSKERAITFA
310 320 330 340 350
ITHDIPNNDV FANLVMSPER EALAYSYVLG RDGGVPLIYT DLDPSGIRNA
360 370 380 390 400
QGEPRWQQSW HEAHMVARIA FHNRMHGLPM VNLEANDDLL VFCRGEQGVV
410 420 430 440 450
IINKSSRNQT VELNWPQALT DVLSDDVFAS NGTHVQIDTA PMTSRMLWVA

PDAQTKK
Length:457
Mass (Da):51,954
Last modified:May 3, 2011 - v1
Checksum:iE06519DAA04E480D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002378 Genomic DNA. Translation: ADT88910.1.
RefSeqiWP_014257654.1. NC_016628.1.
YP_005049230.1. NC_016628.1.

Genome annotation databases

EnsemblBacteriaiADT88910; ADT88910; vfu_B00689.
GeneIDi11564920.
KEGGivfu:vfu_B00689.
PATRICi45431909. VBIVibFur169925_3723.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002378 Genomic DNA. Translation: ADT88910.1 .
RefSeqi WP_014257654.1. NC_016628.1.
YP_005049230.1. NC_016628.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADT88910 ; ADT88910 ; vfu_B00689 .
GeneIDi 11564920.
KEGGi vfu:vfu_B00689.
PATRICi 45431909. VBIVibFur169925_3723.

Phylogenomic databases

KOi K01176.

Enzyme and pathway databases

BioCyci VFUR903510:GHFS-3782-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of a free-living Vibrio furnissii sp. nov. strain (NCTC 11218)."
    Lux T.M., Lee R., Love J.
    J. Bacteriol. 193:1487-1488(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14383 / NCTC 11218Imported.

Entry informationi

Entry nameiF0LYB1_VIBFN
AccessioniPrimary (citable) accession number: F0LYB1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: October 29, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3