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Protein
Submitted name:

DNA ligase

Gene

vfu_A01855

Organism
Vibrio furnissii (strain DSM 14383 / NCTC 11218)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciVFUR903510:GHFS-1846-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
Ordered Locus Names:vfu_A01855Imported
OrganismiVibrio furnissii (strain DSM 14383 / NCTC 11218)Imported
Taxonomic identifieri903510 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000007456 Componenti: Chromosome 1

Family & Domainsi

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0LTS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQLKLTLIAA ALLTAQHAPA IANPLAFVPV AQANEYHDGI NIYEYWQSEK
60 70 80 90 100
LDGIRAIWNG KQLLTRNGNR IYAPHWFTDP LPDYPLEGEL WAGRGHFPLV
110 120 130 140 150
QQTVLDHTPS DAAWRKIDFM LFDMPEAAGD YTKRYYNLKY LVEQAAASHI
160 170 180 190 200
KYIEHSPVLS EAELLNYLDT LTNQNGEGVM LRKVTASYQA GRSNDLLKLK
210 220 230 240 250
KYQDAEARVM GYKFGNGKYK GMMGSLLVRT DEGTEFYVGT GFTDEQRQNP
260 270 280
PEIGSLITYR YNGLTAEGKP RFARFVRFRA VY
Length:282
Mass (Da):32,085
Last modified:May 3, 2011 - v1
Checksum:iAC113887426DFF9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002377 Genomic DNA. Translation: ADT87014.1.
RefSeqiWP_014205058.1. NC_016602.1.
YP_004993026.1. NC_016602.1.

Genome annotation databases

EnsemblBacteriaiADT87014; ADT87014; vfu_A01855.
KEGGivfu:vfu_A01855.
PATRICi45427922. VBIVibFur169925_1788.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002377 Genomic DNA. Translation: ADT87014.1.
RefSeqiWP_014205058.1. NC_016602.1.
YP_004993026.1. NC_016602.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADT87014; ADT87014; vfu_A01855.
KEGGivfu:vfu_A01855.
PATRICi45427922. VBIVibFur169925_1788.

Phylogenomic databases

KOiK10747.

Enzyme and pathway databases

BioCyciVFUR903510:GHFS-1846-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of a free-living Vibrio furnissii sp. nov. strain (NCTC 11218)."
    Lux T.M., Lee R., Love J.
    J. Bacteriol. 193:1487-1488(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14383 / NCTC 11218Imported.

Entry informationi

Entry nameiF0LTS5_VIBFN
AccessioniPrimary (citable) accession number: F0LTS5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: May 27, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.