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F0LNS3 (F0LNS3_VIBFN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:vfu_A00045 EMBL ADT85285.1
OrganismVibrio furnissii (strain DSM 14383 / NCTC 11218) [Complete proteome] [HAMAP] EMBL ADT85285.1
Taxonomic identifier903510 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F0LNS3 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 7291E99E078B8805

FASTA39443,126
        10         20         30         40         50         60 
MSKEKFERTK PHVNVGTIGH VDHGKTTLTA AICTTLAKVY GGAARDFASI DNAPEERERG 

        70         80         90        100        110        120 
ITISTSHVEY DTPSRHYAHV DCPGHADYVK NMITGAAQMD GGILVVAATD GPMPQTREHI 

       130        140        150        160        170        180 
LLGRQVGIPY IIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALGALN 

       190        200        210        220        230        240 
GEEQWEAKIV ELAEALDTYI PEPERAVDMP FLMPIEDVFS IQGRGTVVTG RIERGILKVG 

       250        260        270        280        290        300 
DEVAIVGIHD TTTTTCTGVE MFRKLLDEGR AGENVGALLR GTKRDEVERG QVLAKPGSIT 

       310        320        330        340        350        360 
PHTKFESEVY VLSKDEGGRH TPFFKGYRPQ FYFRTTDVTG NIELPEGVEM VMPGDNIQMI 

       370        380        390 
VELIAPIAMD EGLRFAIREG GRTVGAGVVA KIIA 

« Hide

References

[1]"Complete genome sequence of a free-living Vibrio furnissii sp. nov. strain (NCTC 11218)."
Lux T.M., Lee R., Love J.
J. Bacteriol. 193:1487-1488(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14383 / NCTC 11218.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002377 Genomic DNA. Translation: ADT85285.1.
RefSeqYP_004991297.1. NC_016602.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADT85285; ADT85285; vfu_A00045.
GeneID11635929.
KEGGvfu:vfu_A00045.
PATRIC45424247. VBIVibFur169925_0042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycVFUR903510:GHFS-51-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0LNS3_VIBFN
AccessionPrimary (citable) accession number: F0LNS3
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)