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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

AGROH133_12461

Organism
Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi104Calcium 1UniRule annotation1
Metal bindingi198Calcium 1UniRule annotation1
Metal bindingi204Calcium 1UniRule annotation1
Active sitei235NucleophileUniRule annotation1
Metal bindingi239Calcium 1; via carbonyl oxygenUniRule annotation1
Active sitei265Proton donorUniRule annotation1
Metal bindingi304Calcium 3; via carbonyl oxygenUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
Ordered Locus Names:AGROH133_12461Imported
OrganismiAgrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3))Imported
Taxonomic identifieri861208 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacterium
Proteomesi
  • UP000007455 Componenti: Chromosome linear

Interactioni

Protein-protein interaction databases

STRINGi861208.AGROH133_12461.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 402AamyInterPro annotationAdd BLAST399

Phylogenomic databases

eggNOGiENOG4105E5K. Bacteria.
COG0366. LUCA.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F0LD47-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGRTLLQFF HWYYPDGGKL WSEVAEKAES LARMGITDVW LPPAYKGSAG
60 70 80 90 100
GFSVGYDTYD LFDLGEFDQK GTVATKYGDR AALEQAGRTL KENGIRVIHD
110 120 130 140 150
VVLNHKMGAD EREKVRVRRV NPDDRTEIED EDFEAHAYTR FTFPGRNGTH
160 170 180 190 200
SNFIWDLKCF SGVDHIEEPD EDGIFRLVNE YGDGEWNEEV DEENGNFDYL
210 220 230 240 250
MGADVEFRNR AVYEELKYWG RWLAEQVQVD GFRLDAAKHI PAWFFRDWVG
260 270 280 290 300
HMRDTINPDL FVVAEYWHPD IDALKSYLDL VDKQLMLFDV ALHHRFHDAS
310 320 330 340 350
KQGGDFDMRT IFDGSLLSAV PDHAVTLVDN HDTQPLQSLE APVEPWFKPL
360 370 380 390 400
AYAIILLREE GVPCVFYPDL FGTTYTDTGN DGNDHEIVMP AIECLPKLIE
410 420 430 440 450
ARSRFSNGAQ TDIFDDPSCI AFIRHGTADE PGCVVVMSNG EAAEKQIDLG
460 470 480 490
PEQAGAVWRD FLGHRHEQIT LDEHGKGLFS TNGGSVSVWV PADVE
Length:495
Mass (Da):56,095
Last modified:May 3, 2011 - v1
Checksum:i8F95CC1F0F8E214C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002249 Genomic DNA. Translation: ADY67007.1.
RefSeqiWP_013761950.1. NC_015508.1.

Genome annotation databases

EnsemblBacteriaiADY67007; ADY67007; AGROH133_12461.
KEGGiagr:AGROH133_12461.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002249 Genomic DNA. Translation: ADY67007.1.
RefSeqiWP_013761950.1. NC_015508.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi861208.AGROH133_12461.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADY67007; ADY67007; AGROH133_12461.
KEGGiagr:AGROH133_12461.

Phylogenomic databases

eggNOGiENOG4105E5K. Bacteria.
COG0366. LUCA.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiF0LD47_AGRSH
AccessioniPrimary (citable) accession number: F0LD47
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: May 10, 2017
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.