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F0LD47

- F0LD47_AGRSH

UniProt

F0LD47 - F0LD47_AGRSH

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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

AGROH133_12461

Organism
Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciASP861208:GH59-4062-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
Ordered Locus Names:AGROH133_12461Imported
OrganismiAgrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3))Imported
Taxonomic identifieri861208 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacterium
ProteomesiUP000007455: Chromosome linear

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiTVATRWG.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F0LD47-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MAGRTLLQFF HWYYPDGGKL WSEVAEKAES LARMGITDVW LPPAYKGSAG
60 70 80 90 100
GFSVGYDTYD LFDLGEFDQK GTVATKYGDR AALEQAGRTL KENGIRVIHD
110 120 130 140 150
VVLNHKMGAD EREKVRVRRV NPDDRTEIED EDFEAHAYTR FTFPGRNGTH
160 170 180 190 200
SNFIWDLKCF SGVDHIEEPD EDGIFRLVNE YGDGEWNEEV DEENGNFDYL
210 220 230 240 250
MGADVEFRNR AVYEELKYWG RWLAEQVQVD GFRLDAAKHI PAWFFRDWVG
260 270 280 290 300
HMRDTINPDL FVVAEYWHPD IDALKSYLDL VDKQLMLFDV ALHHRFHDAS
310 320 330 340 350
KQGGDFDMRT IFDGSLLSAV PDHAVTLVDN HDTQPLQSLE APVEPWFKPL
360 370 380 390 400
AYAIILLREE GVPCVFYPDL FGTTYTDTGN DGNDHEIVMP AIECLPKLIE
410 420 430 440 450
ARSRFSNGAQ TDIFDDPSCI AFIRHGTADE PGCVVVMSNG EAAEKQIDLG
460 470 480 490
PEQAGAVWRD FLGHRHEQIT LDEHGKGLFS TNGGSVSVWV PADVE
Length:495
Mass (Da):56,095
Last modified:May 3, 2011 - v1
Checksum:i8F95CC1F0F8E214C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002249 Genomic DNA. Translation: ADY67007.1.
RefSeqiWP_013761950.1. NC_015508.1.
YP_004444098.1. NC_015508.1.

Genome annotation databases

EnsemblBacteriaiADY67007; ADY67007; AGROH133_12461.
GeneIDi10582987.
KEGGiagr:AGROH133_12461.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002249 Genomic DNA. Translation: ADY67007.1 .
RefSeqi WP_013761950.1. NC_015508.1.
YP_004444098.1. NC_015508.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADY67007 ; ADY67007 ; AGROH133_12461 .
GeneIDi 10582987.
KEGGi agr:AGROH133_12461.

Phylogenomic databases

KOi K01176.
OMAi TVATRWG.

Enzyme and pathway databases

BioCyci ASP861208:GH59-4062-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequencing of Agrobacterium sp H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid."
    Wibberg D., Blom J., Jaenicke S., Kollin F., Rupp O., Scharf B., Schneiker-Bekel S., Sczcepanowski R., Goesmann A., Setubal J.C., Schmitt R., Puhler A., Schluter A.
    J. Biotechnol. 155:50-62(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H13-3Imported.

Entry informationi

Entry nameiF0LD47_AGRSH
AccessioniPrimary (citable) accession number: F0LD47
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: October 1, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3