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F0LD47 (F0LD47_AGRSH) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:AGROH133_12461 EMBL ADY67007.1
OrganismAgrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)) [Complete proteome] [HAMAP] EMBL ADY67007.1
Taxonomic identifier861208 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacterium

Protein attributes

Sequence length495 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F0LD47 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 8F95CC1F0F8E214C

FASTA49556,095
        10         20         30         40         50         60 
MAGRTLLQFF HWYYPDGGKL WSEVAEKAES LARMGITDVW LPPAYKGSAG GFSVGYDTYD 

        70         80         90        100        110        120 
LFDLGEFDQK GTVATKYGDR AALEQAGRTL KENGIRVIHD VVLNHKMGAD EREKVRVRRV 

       130        140        150        160        170        180 
NPDDRTEIED EDFEAHAYTR FTFPGRNGTH SNFIWDLKCF SGVDHIEEPD EDGIFRLVNE 

       190        200        210        220        230        240 
YGDGEWNEEV DEENGNFDYL MGADVEFRNR AVYEELKYWG RWLAEQVQVD GFRLDAAKHI 

       250        260        270        280        290        300 
PAWFFRDWVG HMRDTINPDL FVVAEYWHPD IDALKSYLDL VDKQLMLFDV ALHHRFHDAS 

       310        320        330        340        350        360 
KQGGDFDMRT IFDGSLLSAV PDHAVTLVDN HDTQPLQSLE APVEPWFKPL AYAIILLREE 

       370        380        390        400        410        420 
GVPCVFYPDL FGTTYTDTGN DGNDHEIVMP AIECLPKLIE ARSRFSNGAQ TDIFDDPSCI 

       430        440        450        460        470        480 
AFIRHGTADE PGCVVVMSNG EAAEKQIDLG PEQAGAVWRD FLGHRHEQIT LDEHGKGLFS 

       490 
TNGGSVSVWV PADVE 

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References

[1]"Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid."
Wibberg D., Blom J., Jaenicke S., Kollin F., Rupp O., Scharf B., Schneiker-Bekel S., Sczcepanowski R., Goesmann A., Setubal J.C., Schmitt R., Puhler A., Schluter A.
J. Biotechnol. 155:50-62(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: H13-3 EMBL ADY67007.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002249 Genomic DNA. Translation: ADY67007.1.
RefSeqYP_004444098.1. NC_015508.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADY67007; ADY67007; AGROH133_12461.
GeneID10582987.
KEGGagr:AGROH133_12461.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.
OMATVATRWG.

Enzyme and pathway databases

BioCycASP861208:GH59-4062-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF0LD47_AGRSH
AccessionPrimary (citable) accession number: F0LD47
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: May 14, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)