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F0L951 (F0L951_AGRSH) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length391 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site521Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2711Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1491Substrate By similarity HAMAP-Rule MF_01201
Binding site3301Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue521N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F0L951 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 1DF5160D0E0ED862

FASTA39142,228
        10         20         30         40         50         60 
MTDDFEDTFP EHETDAFEHA PLRLTVDLGA LADNWRDMKK RSGKARTAAV VKADAYGLGI 

        70         80         90        100        110        120 
EDCGATLYHA GARDFFVATV SEGATLRSYA PEARIFVLSG IWQGQERQVF DNDLVPVLAS 

       130        140        150        160        170        180 
EEQLSFWMAT VAERGEHPCA LHVDTGFNRL GLPLDDALFL ADDVTRPASF DPVLVLSHLA 

       190        200        210        220        230        240 
CADTPSSPMN KVQLESFRKV SAAFEGIESS LSASAGIFLG PDYHFDLTRP GIALYGGEAI 

       250        260        270        280        290        300 
NDVANPMRPV AKAEARIIQI REAGEGQTVS YGGTYLLKRA SRLAIASVGY ADGYQRSLSG 

       310        320        330        340        350        360 
SGIPLREMGH GGAYGIVNGH KAPVAGRVTM DLTIFDITDI PANAVRTGDY IELFGPKVPL 

       370        380        390 
DEVARAAGTI GYEMLTGLGL RYERQYLMAD D 

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References

[1]"Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid."
Wibberg D., Blom J., Jaenicke S., Kollin F., Rupp O., Scharf B., Schneiker-Bekel S., Sczcepanowski R., Goesmann A., Setubal J.C., Schmitt R., Puhler A., Schluter A.
J. Biotechnol. 155:50-62(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: H13-3 EMBL ADY64003.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002248 Genomic DNA. Translation: ADY64003.1.
RefSeqYP_004278323.1. NC_015183.1.

3D structure databases

ProteinModelPortalF0L951.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADY64003; ADY64003; AGROH133_05164.
GeneID10266779.
KEGGagr:AGROH133_05164.
PATRIC46846828. VBIAgrSp164909_1038.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMAITIKSHV.

Enzyme and pathway databases

BioCycASP861208:GH59-1023-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0L951_AGRSH
AccessionPrimary (citable) accession number: F0L951
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: July 9, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)