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F0L8X6 (F0L8X6_AGRSH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length193 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. RuleBase RU000544 HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding87 – 904ATP By similarity HAMAP-Rule MF_00124

Sites

Active site881Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1451Zinc By similarity HAMAP-Rule MF_00124
Metal binding1471Zinc By similarity HAMAP-Rule MF_00124
Metal binding1821Zinc By similarity HAMAP-Rule MF_00124
Metal binding1851Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
F0L8X6 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 23D574533F36169C

FASTA19321,562
        10         20         30         40         50         60 
MAKLYFNYAA MNAGKSTMLL QASYNYHERG MRTLIFTAAF DDRAGFGRVA SRIGLSSDAR 

        70         80         90        100        110        120 
TFDANTDIFS EVEALHAEAP VACVFIDEAN FLSEHHVWQL AGIADRLNIP VMAYGLRTDF 

       130        140        150        160        170        180 
QGKLFPASRE LLAIADELRE IRTICHCGRK ATMVARFDNE GNVVKEGAQI DVGGNEKYVS 

       190 
FCRRHWVETV KGD 

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References

[1]"Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid."
Wibberg D., Blom J., Jaenicke S., Kollin F., Rupp O., Scharf B., Schneiker-Bekel S., Sczcepanowski R., Goesmann A., Setubal J.C., Schmitt R., Puhler A., Schluter A.
J. Biotechnol. 155:50-62(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: H13-3 EMBL ADY65185.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002248 Genomic DNA. Translation: ADY65185.1.
RefSeqYP_004279505.1. NC_015183.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADY65185; ADY65185; AGROH133_07920.
GeneID10267983.
KEGGagr:AGROH133_07920.
PATRIC46849279. VBIAgrSp164909_2230.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.
OMARTICHCG.

Enzyme and pathway databases

BioCycASP861208:GH59-2227-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF0L8X6_AGRSH
AccessionPrimary (citable) accession number: F0L8X6
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 16, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)