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Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

YE105_C1296

Organism
Yersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciYENT994476:GHRB-1367-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentImported
Gene namesi
Ordered Locus Names:YE105_C1296Imported
OrganismiYersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))Imported
Taxonomic identifieri994476 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000009271: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK00164.
OMAiQNQGAWF.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

F0L164-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAWLDSSYL AGANQSYIEQ LYEDFLTDPG SVDDSWRSIF LQLPTTGVKP
60 70 80 90 100
DQFHSQTREY FRRLAKDPSR YNSSISDPEN DAKQVKVLQL INAFRFRGHQ
110 120 130 140 150
HANLDPLGLW KQESVPDLDP AYHHLTEADF QNTFNVGSFA IGKETMKLSD
160 170 180 190 200
LYAALKQTYC GSIGAEYMHI TNTEEKRWLQ QRIESVVGKP TFSDEEKRRF
210 220 230 240 250
LSELTAAEGL ERYLGAKFPG AKRFSLEGGD SLVTMLKEMI RHAGKNGTRE
260 270 280 290 300
VVLGMAHRGR LNVLINVLGK KPEDLFDEFA GKHKEHLGTG DVKYHQGFSS
310 320 330 340 350
DVETEGGLVH LALAFNPSHL EIVSPVVIGS VRARRDRLDE ARSNMVLPIT
360 370 380 390 400
IHGDAAIAGQ GVVQETLNMS QARGYEVGGT VRIVINNQIG FTTSNPLDAR
410 420 430 440 450
STQYCTDIAK MVQAPIFHVN ADDPEAVAFV TRLALDFRNT FKRDVMIDLV
460 470 480 490 500
CYRRHGHNEA DEPSATQPVM YQKIKKHPTP RKIYADKLTE QNIASLEDAT
510 520 530 540 550
EMVNLYRDAL DRGDCVVEEW RPMNLQSFTW SPYLNHEWDE EYPSKVDMKR
560 570 580 590 600
LQDLARRISH APDAIEMQSR VAKIYGDRAL MASGEKPFDW GGAETLAYAT
610 620 630 640 650
LVDEGIPIRL SGEDAGRGTF FHRHAVIHNQ KNGSVYVPLA NIHSGQGDFQ
660 670 680 690 700
VWDSVLSEEA VLAFEYGYAT AEPRTLTIWE AQFGDFANGA QVVIDQFISS
710 720 730 740 750
GEQKWGRMCG LVMLLPHGYE GQGPEHSSAR LERYLQLCAE QNMQVCIPST
760 770 780 790 800
PAQVYHMIRR QALRGMRRPL VVMSPKSLLR HPLAISSLDE LANGSFLPAI
810 820 830 840 850
GEIDELDPKG VKRVVMCSGK VYYDLLEQRR KNGQTDVAIV RIEQLYPFPH
860 870 880 890 900
QAVQAVLEQF AHVHDFVWCQ EEPLNQGAWY CSQHNFREVI PFGASLRYAG
910 920 930
RPASASPAVG YISVHQKQQQ ALVNDALTVE
Length:930
Mass (Da):104,642
Last modified:May 3, 2011 - v1
Checksum:i96B08DECC6A6FC2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002246 Genomic DNA. Translation: ADZ41792.1.
RefSeqiYP_004297495.1. NC_015224.1.

Genome annotation databases

EnsemblBacteriaiADZ41792; ADZ41792; YE105_C1296.
GeneIDi10301131.
KEGGiyep:YE105_C1296.
PATRICi47214344. VBIYerEnt184081_1381.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002246 Genomic DNA. Translation: ADZ41792.1.
RefSeqiYP_004297495.1. NC_015224.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ41792; ADZ41792; YE105_C1296.
GeneIDi10301131.
KEGGiyep:YE105_C1296.
PATRICi47214344. VBIYerEnt184081_1381.

Phylogenomic databases

KOiK00164.
OMAiQNQGAWF.

Enzyme and pathway databases

BioCyciYENT994476:GHRB-1367-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of a Yersinia enterocolitica "Old World" (3/O:9) strain and comparison with the "New World" (1B/O:8) strain."
    Wang X., Li Y., Jing H., Ren Y., Zhou Z., Wang S., Kan B., Xu J., Wang L.
    J. Clin. Microbiol. 49:1251-1259(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 105.5R(r)Imported.

Entry informationi

Entry nameiF0L164_YERE3
AccessioniPrimary (citable) accession number: F0L164
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: March 4, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.