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Protein

Glutamate decarboxylase

Gene

YE105_C3391

Organism
Yersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciYENT994476:GHRB-3553-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:YE105_C3391Imported
OrganismiYersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))Imported
Taxonomic identifieri994476 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000009271: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiICFRIKE.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F0KXG2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTRKSLDDYR STLLDSRFGS QAIRNISENK EFPKEEMRED IAFQIISDEL
60 70 80 90 100
FLDGNARQNL ATFCQTWDDD NVHKLMDLSI NKNWIDKEEY PQSAAIDLRC
110 120 130 140 150
VNMMADLWNA PTPKGGQGVG TNTIGSSEAC MLGGMAMKWR WRKKMEVAGK
160 170 180 190 200
PTNKPNFVCG PVQICWHKFA RYWDVEIREI PMIPGQLFMD PKRMIEACDE
210 220 230 240 250
NTIGVVPTFG VTYTGNYELP KPLHEALDKL QKDTGLDIDM HIDAASGGFL
260 270 280 290 300
APFVAPDIEW DFRLPRVKSI STSGHKFGLA PLGCGWVIWR DAAALPEELI
310 320 330 340 350
FNVDYLGGQI GTFAINFSRP AGQVISQYYE FIRLGREGYT KVQSACYQVA
360 370 380 390 400
EFLAKEIAPL GPYEFYFNGN PNEGIPAICF RIKEGAKPGY TLYDLSERLR
410 420 430 440 450
LRGWQVPAFT LCGKMSDVVV MRIMCRRGFE MDFAELLLDD YKASLKYLSE
460
HPSLGGEASQ NSFSHT
Length:466
Mass (Da):52,690
Last modified:May 3, 2011 - v1
Checksum:iB8AF2CF083789EB1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002246 Genomic DNA. Translation: ADZ43885.1.
RefSeqiYP_004299588.1. NC_015224.1.

Genome annotation databases

EnsemblBacteriaiADZ43885; ADZ43885; YE105_C3391.
GeneIDi10303225.
KEGGiyep:YE105_C3391.
PATRICi47219099. VBIYerEnt184081_3699.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002246 Genomic DNA. Translation: ADZ43885.1.
RefSeqiYP_004299588.1. NC_015224.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ43885; ADZ43885; YE105_C3391.
GeneIDi10303225.
KEGGiyep:YE105_C3391.
PATRICi47219099. VBIYerEnt184081_3699.

Phylogenomic databases

KOiK01580.
OMAiICFRIKE.

Enzyme and pathway databases

BioCyciYENT994476:GHRB-3553-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of a Yersinia enterocolitica "Old World" (3/O:9) strain and comparison with the "New World" (1B/O:8) strain."
    Wang X., Li Y., Jing H., Ren Y., Zhou Z., Wang S., Kan B., Xu J., Wang L.
    J. Clin. Microbiol. 49:1251-1259(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 105.5R(r)Imported.

Entry informationi

Entry nameiF0KXG2_YERE3
AccessioniPrimary (citable) accession number: F0KXG2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: February 4, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.