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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

YE105_C1767

Organism
Yersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei235 – 2351NucleophileUniRule annotation
Active sitei265 – 2651Proton donorUniRule annotation

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciYENT994476:GHRB-1851-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
Ordered Locus Names:YE105_C1767Imported
OrganismiYersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))Imported
Taxonomic identifieri994476 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000009271: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiFFHWYYP.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F0KQT5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKNATIFQFF HWYYPDGGKL WQEVAERAEH ISHLGINYVW LPPAYKGASG
60 70 80 90 100
GYSVGYDTYD LFDLGEFDQK GTRATKYGDK EELLNAINRL KEMDIKVLFD
110 120 130 140 150
VVLNHKMGAD EKEPVSVHKV NPENRTEIDE AVIDAQAYTR FTFPGRNETY
160 170 180 190 200
SSFLWDKQCF SGVDHIEDPT DEGIFKIIND YSDEGWNTEV DDELGNFDYL
210 220 230 240 250
MGADIDFRNP AVMGELMYWG EWLLDTLPID GFRLDAVKHI PAWFFKQWIQ
260 270 280 290 300
HVQNKANNDL LIIAEYWSPN IEKLQQYLER VDGSAMLFDV ALHHKFHEAS
310 320 330 340 350
NQGEDFDLTQ MFSGTLIEAD PMHTITIVAN HDTQPLQSLE APVEPWFKPL
360 370 380 390 400
AYALILIREQ GIPCVFYPDL FGASYEDTGD DGGIYQIEMP IIAELEKLIQ
410 420 430 440 450
ARTRFAHGAQ IDYFDDKNCI AFVRSGTEED PGCVVVLSNG AENEKTIQLG
460 470 480 490
EDLANKEFAD FLGNHSAIIT TDDCGEAAFP VNGGSVSLWV QKEFCENQA
Length:499
Mass (Da):56,723
Last modified:May 3, 2011 - v1
Checksum:i4259ADBEC1B97A08
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002246 Genomic DNA. Translation: ADZ42263.1.
RefSeqiWP_013649731.1. NC_015224.1.
YP_004297966.1. NC_015224.1.

Genome annotation databases

EnsemblBacteriaiADZ42263; ADZ42263; YE105_C1767.
GeneIDi10301602.
KEGGiyep:YE105_C1767.
PATRICi47215389. VBIYerEnt184081_1892.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002246 Genomic DNA. Translation: ADZ42263.1.
RefSeqiWP_013649731.1. NC_015224.1.
YP_004297966.1. NC_015224.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ42263; ADZ42263; YE105_C1767.
GeneIDi10301602.
KEGGiyep:YE105_C1767.
PATRICi47215389. VBIYerEnt184081_1892.

Phylogenomic databases

KOiK01176.
OMAiFFHWYYP.

Enzyme and pathway databases

BioCyciYENT994476:GHRB-1851-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of a Yersinia enterocolitica "Old World" (3/O:9) strain and comparison with the "New World" (1B/O:8) strain."
    Wang X., Li Y., Jing H., Ren Y., Zhou Z., Wang S., Kan B., Xu J., Wang L.
    J. Clin. Microbiol. 49:1251-1259(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 105.5R(r)Imported.

Entry informationi

Entry nameiF0KQT5_YERE3
AccessioniPrimary (citable) accession number: F0KQT5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: February 4, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.