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F0KER4 (F0KER4_CLOAE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
Ordered Locus Names:CEA_P0166 EMBL ADZ22949.1
Encoded onPlasmid EA2018plasmid EMBL ADZ22949.1
OrganismClostridium acetobutylicum (strain EA 2018) [Complete proteome] [HAMAP] EMBL ADZ22949.1
Taxonomic identifier863638 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length760 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequences

Sequence LengthMass (Da)Tools
F0KER4 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 10E146F40252F6D0

FASTA76083,045
        10         20         30         40         50         60 
MSKRSKLLKR RMLSLSVICV LIGYGPVFNP VRSQAKVMTY SSENRELPEN TKDGVMLHAF 

        70         80         90        100        110        120 
DWSFNNIKKE LPSIAAAGYK AVQVSPVQGT KSNSTNSSDW WLLYQPTNQA IGNAQLGSYD 

       130        140        150        160        170        180 
DFKSLCSEAK NYGISIVVDV VMNHMANNGN DDEVASEVDP SFKDPSLYHH NGQCTDWNNR 

       190        200        210        220        230        240 
QDVTQEGIGM PDLNTQSSAV QSKAITFLNQ CVDAGATGFR FDAAKHIETD LGLDANKSWS 

       250        260        270        280        290        300 
GNYWENVLGS LHNKSNLYIY GEVLQDGKVD NISAYESFMN VEASAYDGSL RGAIKSGDLT 

       310        320        330        340        350        360 
NAQGMGGLDS NKCVDMLETH DEYEHNESKD LTDWQRKAGW AIAASRAGSV PLFFDRPTGN 

       370        380        390        400        410        420 
IGSEGDALWK DSDVVAVNEF HNAMAGQNEY LRLQNNNKAM IIERGSKGAV IVNEGDSFNL 

       430        440        450        460        470        480 
NTPTNLEDGN YDNHGSATDS LTVSQGRMTG TVPANSIIVI YNKNSNPGSD RVTLSEQAAK 

       490        500        510        520        530        540 
AGDSVTITYD AGTTALKDAS NVNLYWGYDG FSAATSKAMT SLGDNKWQTT ITVPKEVTKN 

       550        560        570        580        590        600 
VNFSFTDGTS WDNNNGANWN IPLASNYLPH AGYKVDYDSS NLVSGNNFTI YYNGNLANSS 

       610        620        630        640        650        660 
NVSLHWGVNG WSNMQNLAMV KDSNGFWEAT IAIPASSNTL NFCFTNGSSW DNNNNNNWTL 

       670        680        690        700        710        720 
NTWSSVPKVQ VTPAPEACKQ ISVYYNGSLA SSASNITLHW GCNGFTSPQD INMVKQADGR 

       730        740        750        760 
WLANITLPSG CYNVNMAFKD QSGTWDNNNS NNYNFSSTNN 

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References

[1]"Comparative genomic and transcriptomic analysis revealed genetic characteristics related to solvent formation and xylose utilization in Clostridium acetobutylicum EA 2018."
Hu S., Zheng H., Gu Y., Zhao J., Zhang W., Yang Y., Wang S., Zhao G., Yang S., Jiang W.
BMC Genomics 12:93-93(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002119 Genomic DNA. Translation: ADZ22949.1.
RefSeqYP_005673044.1. NC_017296.1.

3D structure databases

ProteinModelPortalF0KER4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ22949; ADZ22949; CEA_P0166.
GeneID12232697.
KEGGcay:CEA_P0166.
PATRIC47114904. VBICloAce167171_3957.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.
OMAGQNIFVV.

Enzyme and pathway databases

BioCycCACE863638:GLBA-4014-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 3 hits.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
SM01066. CBM_25. 3 hits.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF0KER4_CLOAE
AccessionPrimary (citable) accession number: F0KER4
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: July 9, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)