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F0KER4

- F0KER4_CLOAE

UniProt

F0KER4 - F0KER4_CLOAE

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Protein

Alpha-amylase

Gene
CEA_P0166
Organism
Clostridium acetobutylicum (strain EA 2018)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciCACE863638:GLBA-4014-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:CEA_P0166Imported
Encoded oniPlasmid EA2018
OrganismiClostridium acetobutylicum (strain EA 2018)Imported
Taxonomic identifieri863638 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000007476: Plasmid EA2018

Structurei

3D structure databases

ProteinModelPortaliF0KER4.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.
OMAiGQNIFVV.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 3 hits.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
SM01066. CBM_25. 3 hits.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F0KER4-1 [UniParc]FASTAAdd to Basket

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MSKRSKLLKR RMLSLSVICV LIGYGPVFNP VRSQAKVMTY SSENRELPEN    50
TKDGVMLHAF DWSFNNIKKE LPSIAAAGYK AVQVSPVQGT KSNSTNSSDW 100
WLLYQPTNQA IGNAQLGSYD DFKSLCSEAK NYGISIVVDV VMNHMANNGN 150
DDEVASEVDP SFKDPSLYHH NGQCTDWNNR QDVTQEGIGM PDLNTQSSAV 200
QSKAITFLNQ CVDAGATGFR FDAAKHIETD LGLDANKSWS GNYWENVLGS 250
LHNKSNLYIY GEVLQDGKVD NISAYESFMN VEASAYDGSL RGAIKSGDLT 300
NAQGMGGLDS NKCVDMLETH DEYEHNESKD LTDWQRKAGW AIAASRAGSV 350
PLFFDRPTGN IGSEGDALWK DSDVVAVNEF HNAMAGQNEY LRLQNNNKAM 400
IIERGSKGAV IVNEGDSFNL NTPTNLEDGN YDNHGSATDS LTVSQGRMTG 450
TVPANSIIVI YNKNSNPGSD RVTLSEQAAK AGDSVTITYD AGTTALKDAS 500
NVNLYWGYDG FSAATSKAMT SLGDNKWQTT ITVPKEVTKN VNFSFTDGTS 550
WDNNNGANWN IPLASNYLPH AGYKVDYDSS NLVSGNNFTI YYNGNLANSS 600
NVSLHWGVNG WSNMQNLAMV KDSNGFWEAT IAIPASSNTL NFCFTNGSSW 650
DNNNNNNWTL NTWSSVPKVQ VTPAPEACKQ ISVYYNGSLA SSASNITLHW 700
GCNGFTSPQD INMVKQADGR WLANITLPSG CYNVNMAFKD QSGTWDNNNS 750
NNYNFSSTNN 760
Length:760
Mass (Da):83,045
Last modified:May 3, 2011 - v1
Checksum:i10E146F40252F6D0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002119 Genomic DNA. Translation: ADZ22949.1.
RefSeqiWP_010890852.1. NC_017296.1.
YP_005673044.1. NC_017296.1.

Genome annotation databases

EnsemblBacteriaiADZ22949; ADZ22949; CEA_P0166.
GeneIDi12232697.
KEGGicay:CEA_P0166.
PATRICi47114904. VBICloAce167171_3957.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002119 Genomic DNA. Translation: ADZ22949.1 .
RefSeqi WP_010890852.1. NC_017296.1.
YP_005673044.1. NC_017296.1.

3D structure databases

ProteinModelPortali F0KER4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADZ22949 ; ADZ22949 ; CEA_P0166 .
GeneIDi 12232697.
KEGGi cay:CEA_P0166.
PATRICi 47114904. VBICloAce167171_3957.

Phylogenomic databases

KOi K01176.
OMAi GQNIFVV.

Enzyme and pathway databases

BioCyci CACE863638:GLBA-4014-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 3 hits.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00632. Aamy_C. 1 hit.
SM01066. CBM_25. 3 hits.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Comparative genomic and transcriptomic analysis revealed genetic characteristics related to solvent formation and xylose utilization in Clostridium acetobutylicum EA 2018."
    Hu S., Zheng H., Gu Y., Zhao J., Zhang W., Yang Y., Wang S., Zhao G., Yang S., Jiang W.
    BMC Genomics 12:93-93(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EA 2018.

Entry informationi

Entry nameiF0KER4_CLOAE
AccessioniPrimary (citable) accession number: F0KER4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: September 3, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported

External Data

Dasty 3

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