Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Superoxide dismutase (Fe/Mn family)

Gene

CEA_G2578

Organism
Clostridium acetobutylicum (strain EA 2018)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCACE863638:GLBA-2625-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase (Fe/Mn family)Imported
Gene namesi
Ordered Locus Names:CEA_G2578Imported
OrganismiClostridium acetobutylicum (strain EA 2018)Imported
Taxonomic identifieri863638 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000007476: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF0KDG5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.
OMAiDAHDNGA.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

F0KDG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MITEKKYNFN SLAGFSNELL KAHYDIYVNY INDLNKLWKV SYTPGFRSDD
60 70 80 90 100
TNHSLMRSLK SKEIYTLNGI KLHELYFENM TGKNTKPYGP ILKEIGKQFS
110 120 130 140 150
SYNNFISYLT EVAISMKGWV ILSIDSLDGR FHLFGNDFHD TSAILASHPL
160 170 180 190 200
MVLDVQEHSY FKDFINDKGK YVETFINNLD WKILNDRFKA YIFQNKLRTL
210 220
SRSDGDFGVC PFMSMQDTFY
Length:220
Mass (Da):25,743
Last modified:May 3, 2011 - v1
Checksum:i108109D9D490CE52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002118 Genomic DNA. Translation: ADZ21615.1.
RefSeqiWP_010965857.1. NC_017295.1.
YP_005671710.1. NC_017295.1.

Genome annotation databases

EnsemblBacteriaiADZ21615; ADZ21615; CEA_G2578.
GeneIDi12235339.
KEGGicay:CEA_G2578.
PATRICi47112081. VBICloAce167171_2604.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002118 Genomic DNA. Translation: ADZ21615.1.
RefSeqiWP_010965857.1. NC_017295.1.
YP_005671710.1. NC_017295.1.

3D structure databases

ProteinModelPortaliF0KDG5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ21615; ADZ21615; CEA_G2578.
GeneIDi12235339.
KEGGicay:CEA_G2578.
PATRICi47112081. VBICloAce167171_2604.

Phylogenomic databases

KOiK04564.
OMAiDAHDNGA.

Enzyme and pathway databases

BioCyciCACE863638:GLBA-2625-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomic and transcriptomic analysis revealed genetic characteristics related to solvent formation and xylose utilization in Clostridium acetobutylicum EA 2018."
    Hu S., Zheng H., Gu Y., Zhao J., Zhang W., Yang Y., Wang S., Zhao G., Yang S., Jiang W.
    BMC Genomics 12:93-93(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EA 2018Imported.

Entry informationi

Entry nameiF0KDG5_CLOAE
AccessioniPrimary (citable) accession number: F0KDG5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: March 4, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.