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Protein
Submitted name:

Germ cell-specific gene 1 protein

Gene

Gsg1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Germ cell-specific gene 1 proteinImported
Gene namesi
Name:Gsg1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:1194499. Gsg1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3120HelicalSequence analysisAdd
BLAST
Transmembranei134 – 15219HelicalSequence analysisAdd
BLAST
Transmembranei164 – 18825HelicalSequence analysisAdd
BLAST
Transmembranei208 – 23124HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiE9QQ16.
ExpressionAtlasiE9QQ16. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliE9QQ16.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00390000011933.

Family and domain databases

InterProiIPR012478. GSG-1.
[Graphical view]
PfamiPF07803. GSG-1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9QQ16-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEFQKGSSDQ RTFISAILNM LSLGLSTASL LSSEWFVGTQ KVPKPLCGQS
60 70 80 90 100
LAAKCFDMPM SLDGGIANTS AQEVVQYTWE TGDDRFSFLA FRSGMWLSCE
110 120 130 140 150
ETMEEPGEKC RRFIELTPPA QREVFWLSLG AQTAYIGLQL ISFLLLLTDL
160 170 180 190 200
LLTTNPGCGL KLSAFAAVSL VLSGLLGMVA HMLYSQVFQA TANLGPEDWR
210 220 230 240 250
PHSWNYGWAF YTAWVSFTCC MASAVTTFNM YTRMVLEFKC RHSKSFNTNP
260 270 280 290 300
SCLAQHHRCF LPPPLTCTTH AGEPLSSCHQ YPSHPIRSVS EAIDLYSALQ
310 320
DKEFQQGISQ ELKEVVEPSV EEQR
Length:324
Mass (Da):36,153
Last modified:April 5, 2011 - v1
Checksum:i7BD5B007AC0C09DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122820 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000111909; ENSMUSP00000107540; ENSMUSG00000030206.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122820 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliE9QQ16.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000111909; ENSMUSP00000107540; ENSMUSG00000030206.

Organism-specific databases

MGIiMGI:1194499. Gsg1.

Phylogenomic databases

GeneTreeiENSGT00390000011933.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiE9QQ16.
ExpressionAtlasiE9QQ16. baseline and differential.

Family and domain databases

InterProiIPR012478. GSG-1.
[Graphical view]
PfamiPF07803. GSG-1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9QQ16_MOUSE
AccessioniPrimary (citable) accession number: E9QQ16
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: June 8, 2016
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.