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Protein
Submitted name:

Probable 28S rRNA (cytosine-C(5))-methyltransferase

Gene

Nop2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Probable 28S rRNA (cytosine-C(5))-methyltransferaseImported
Gene namesi
Name:Nop2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:107891. Nop2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiE9QN31.
MaxQBiE9QN31.
PaxDbiE9QN31.
PRIDEiE9QN31.

Expressioni

Gene expression databases

BgeeiE9QN31.
ExpressionAtlasiE9QN31. baseline and differential.
GenevisibleiE9QN31. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000047123.

Structurei

3D structure databases

ProteinModelPortaliE9QN31.
SMRiE9QN31. Positions 265-579.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini285 – 572288SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1122. Eukaryota.
COG0144. LUCA.
GeneTreeiENSGT00660000095341.
KOiK14835.
OMAiAGEMEQD.
OrthoDBiEOG7FBRHF.
TreeFamiTF105660.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR031341. Methyltr_RsmF_N.
IPR001678. MeTrfase_RsmB/NOP2.
IPR011023. Nop2p.
IPR012586. P120R_rpt.
IPR023267. RCMT.
IPR023273. RCMT_NOP2.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF17125. Methyltr_RsmF_N. 1 hit.
PF08062. P120R. 2 hits.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02012. RCMTNOP2.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00446. nop2p. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9QN31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRKLDPTKK EKRGPGRKAR KQKGAETELV RFLPAAGDEN SKRLSSRARK
60 70 80 90 100
RAAKRRAGSV DVPKPNKSPG IKTLPGELSK GAVQARGKKR PAPIQNSDGD
110 120 130 140 150
EEEDSGEDDV VTQGDLWGSE DSDEDMVDDY GAASNSEDEE EKLLPIERAA
160 170 180 190 200
LKQKAQDATA GVLWNEEDTD EDEDDDGVSP ESHPRKDDKA EGDLQINVED
210 220 230 240 250
EEAFVLPPAG ETDQDGQAPD LQRVHKRIQD IVGVLRDFGA QREEGRSRAE
260 270 280 290 300
YLSRLQKDLA TYYSYGDFLL SKLMELFPLS ELIEFLEANE VPRPITLRTN
310 320 330 340 350
TLKTRRRDLA QALINRGVNL DPLGKWSKSG LVVYDSSVPI GATPEYLAGH
360 370 380 390 400
YMLQGASSML PVMALAPQEH ERILDMCCAP GGKTSYIAQL MKNTGVILAN
410 420 430 440 450
DANADRLKSV VGNLHRLGVT NTIISHYDGR QFPKVVGGFD RVLLDAPCSG
460 470 480 490 500
TGVISKDPAV KTNKDEKDIQ RCAHLQKELL LSAIDSVNAA SKTGGYLVYC
510 520 530 540 550
TCSITVEENE WVVDYALKKR NVRLVPTGLD FGQEGFTRFQ ARRFHPTLRS
560 570 580 590 600
TRRFYPHTHN MDGFFIAKFK KFSNSIPQPH AGNSAAATPT EPDLKDQVTP
610 620 630 640 650
KSENGSQPTK KARGAVKAKQ QLLRQPHSKK PFQKLNGIAK GPGLSTEPSV
660 670 680 690 700
PDAQVSTRPS QSAGNADVNS KRKRSEKLKQ RGPKWKPSKE AAVPKPSAPS
710 720 730 740 750
RVEDSRTPPV PTPSEIRAAP RPKDCAPSLG EAKKKQKGKQ QLAQQPANGA
760 770 780 790
APLKEDAVSK GPSAPFVSPH SSTRPPPAKR RKSMTKGNSQ PLLS
Length:794
Mass (Da):86,907
Last modified:April 5, 2011 - v1
Checksum:i1520EFF0D1854C3C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC166162 Genomic DNA. No translation available.
RefSeqiNP_620086.2. NM_138747.2.
UniGeneiMm.29203.

Genome annotation databases

EnsembliENSMUST00000044200; ENSMUSP00000047123; ENSMUSG00000038279.
GeneIDi110109.
KEGGimmu:110109.
UCSCiuc009dtn.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC166162 Genomic DNA. No translation available.
RefSeqiNP_620086.2. NM_138747.2.
UniGeneiMm.29203.

3D structure databases

ProteinModelPortaliE9QN31.
SMRiE9QN31. Positions 265-579.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000047123.

Proteomic databases

EPDiE9QN31.
MaxQBiE9QN31.
PaxDbiE9QN31.
PRIDEiE9QN31.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000044200; ENSMUSP00000047123; ENSMUSG00000038279.
GeneIDi110109.
KEGGimmu:110109.
UCSCiuc009dtn.2. mouse.

Organism-specific databases

CTDi4839.
MGIiMGI:107891. Nop2.

Phylogenomic databases

eggNOGiKOG1122. Eukaryota.
COG0144. LUCA.
GeneTreeiENSGT00660000095341.
KOiK14835.
OMAiAGEMEQD.
OrthoDBiEOG7FBRHF.
TreeFamiTF105660.

Miscellaneous databases

NextBioi363343.
SOURCEiSearch...

Gene expression databases

BgeeiE9QN31.
ExpressionAtlasiE9QN31. baseline and differential.
GenevisibleiE9QN31. MM.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR031341. Methyltr_RsmF_N.
IPR001678. MeTrfase_RsmB/NOP2.
IPR011023. Nop2p.
IPR012586. P120R_rpt.
IPR023267. RCMT.
IPR023273. RCMT_NOP2.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF17125. Methyltr_RsmF_N. 1 hit.
PF08062. P120R. 2 hits.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02012. RCMTNOP2.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00446. nop2p. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9QN31_MOUSE
AccessioniPrimary (citable) accession number: E9QN31
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 11, 2016
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.