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E9QB19

- E9QB19_DANRE

UniProt

E9QB19 - E9QB19_DANRE

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Protein
Submitted name: Uncharacterized protein
Gene
tgm1l1, si:ch211-9d9.3
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Binds 1 calcium ion per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei369 – 3691 By similarityUniRule annotation
Active sitei428 – 4281 By similarityUniRule annotation
Active sitei451 – 4511 By similarityUniRule annotation
Metal bindingi491 – 4911Calcium By similarity
Metal bindingi493 – 4931Calcium By similarity
Metal bindingi540 – 5401Calcium By similarity
Metal bindingi545 – 5451Calcium By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

GO - Biological processi

  1. peptide cross-linking Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:tgm1l1Imported
Synonyms:si:ch211-9d9.3Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 2

Organism-specific databases

ZFINiZDB-GENE-060503-139. tgm1l1.

Expressioni

Gene expression databases

BgeeiE9QB19.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00740000115156.
KOiK05619.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9QB19-1 [UniParc]FASTAAdd to Basket

« Hide

MPGERQSIRD NSAVGRFHGV SARNGEAVAE KPSESKTKKP ESGCRRWLRK    50
ACPCCLRRQS NSYDLTSEAD GVVAGNEEIE QPASPVSVSV ETNVDDLSLV 100
VRSVDLLSRK TDRNKKEHHT DQYSGDQLII RRGQTFQIEL ELSRPFNPNT 150
DKLHLELKTG ALPLVSKGTH IIIPLVEELQ DERWEAKIVE QNLNRAKLSI 200
NSSVNAVIGK YTLTVVTQCL KTNESTTHDP EKDIYMLFNP WCEDDAVFME 250
GERELNEYVL NDTGRIYYGT EKQIGARTWN FGQFDEGILE ACLFVLDNSE 300
VPPSGRGDPV NVVRVISAMI NSPDDRGVLE GNWSGNYTGG TSPTAWSGSV 350
EILKQYHREG GTPVKYGQCW VFSGVTTTVL RCLGIPARSV TNFQSAHDTD 400
VSLTTDVYFD EDMEPIHHLN SDSVWNFHVW NDCWLARPDL PPGFGGWQAV 450
DSTPQETSHG TFRCGPASLA AVRSGQVYLK YDVPFVFAEV NSDKIYWQRN 500
LDGTFSQIHS EKKAVGHCIS TKAVGSDERV DITDVYKYPE GSEEERIAVE 550
TACRYGSKPD VYSSAMAEDV QVEVRMEGEG PRMGGDAQLK IVVKNMSSQP 600
RRTTLHSQAA VMYYTGVLKD TVKKDKLSVE LMPQEEKVIE WTLPYTQYQN 650
QLVDQAALML TLSGRVSETQ QVLANQTSFR LRTPDLQIEP IGEAYVGKEA 700
SAKISFTNPL PCTLRNVVVR VEGLGLRDLH PIKVGDVGKH GKVMVTEHFI 750
PSIAGERKLV ASLDCKQLTQ VHGVADIIVH ESQ 783
Length:783
Mass (Da):87,201
Last modified:April 5, 2011 - v1
Checksum:i5F5CBD2C291BC3C6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL929335 Genomic DNA. No translation available.
RefSeqiXP_694950.3. XM_689858.5.
UniGeneiDr.155825.
Dr.78708.

Genome annotation databases

EnsembliENSDART00000027444; ENSDARP00000012174; ENSDARG00000012130.
GeneIDi566581.
KEGGidre:566581.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL929335 Genomic DNA. No translation available.
RefSeqi XP_694950.3. XM_689858.5.
UniGenei Dr.155825.
Dr.78708.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSDART00000027444 ; ENSDARP00000012174 ; ENSDARG00000012130 .
GeneIDi 566581.
KEGGi dre:566581.

Organism-specific databases

CTDi 566581.
ZFINi ZDB-GENE-060503-139. tgm1l1.

Phylogenomic databases

GeneTreei ENSGT00740000115156.
KOi K05619.

Miscellaneous databases

NextBioi 20888264.

Gene expression databases

Bgeei E9QB19.

Family and domain databases

Gene3Di 2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view ]
PANTHERi PTHR11590. PTHR11590. 1 hit.
Pfami PF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
SMARTi SM00460. TGc. 1 hit.
[Graphical view ]
SUPFAMi SSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.
  2. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.

Entry informationi

Entry nameiE9QB19_DANRE
AccessioniPrimary (citable) accession number: E9QB19
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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