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E9QB19 (E9QB19_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length783 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000012174

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3691 By similarity PIRSR PIRSR000459-1
Active site4281 By similarity PIRSR PIRSR000459-1
Active site4511 By similarity PIRSR PIRSR000459-1
Metal binding4911Calcium By similarity
Metal binding4931Calcium By similarity
Metal binding5401Calcium By similarity
Metal binding5451Calcium By similarity

Sequences

Sequence LengthMass (Da)Tools
E9QB19 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 5F5CBD2C291BC3C6

FASTA78387,201
        10         20         30         40         50         60 
MPGERQSIRD NSAVGRFHGV SARNGEAVAE KPSESKTKKP ESGCRRWLRK ACPCCLRRQS 

        70         80         90        100        110        120 
NSYDLTSEAD GVVAGNEEIE QPASPVSVSV ETNVDDLSLV VRSVDLLSRK TDRNKKEHHT 

       130        140        150        160        170        180 
DQYSGDQLII RRGQTFQIEL ELSRPFNPNT DKLHLELKTG ALPLVSKGTH IIIPLVEELQ 

       190        200        210        220        230        240 
DERWEAKIVE QNLNRAKLSI NSSVNAVIGK YTLTVVTQCL KTNESTTHDP EKDIYMLFNP 

       250        260        270        280        290        300 
WCEDDAVFME GERELNEYVL NDTGRIYYGT EKQIGARTWN FGQFDEGILE ACLFVLDNSE 

       310        320        330        340        350        360 
VPPSGRGDPV NVVRVISAMI NSPDDRGVLE GNWSGNYTGG TSPTAWSGSV EILKQYHREG 

       370        380        390        400        410        420 
GTPVKYGQCW VFSGVTTTVL RCLGIPARSV TNFQSAHDTD VSLTTDVYFD EDMEPIHHLN 

       430        440        450        460        470        480 
SDSVWNFHVW NDCWLARPDL PPGFGGWQAV DSTPQETSHG TFRCGPASLA AVRSGQVYLK 

       490        500        510        520        530        540 
YDVPFVFAEV NSDKIYWQRN LDGTFSQIHS EKKAVGHCIS TKAVGSDERV DITDVYKYPE 

       550        560        570        580        590        600 
GSEEERIAVE TACRYGSKPD VYSSAMAEDV QVEVRMEGEG PRMGGDAQLK IVVKNMSSQP 

       610        620        630        640        650        660 
RRTTLHSQAA VMYYTGVLKD TVKKDKLSVE LMPQEEKVIE WTLPYTQYQN QLVDQAALML 

       670        680        690        700        710        720 
TLSGRVSETQ QVLANQTSFR LRTPDLQIEP IGEAYVGKEA SAKISFTNPL PCTLRNVVVR 

       730        740        750        760        770        780 
VEGLGLRDLH PIKVGDVGKH GKVMVTEHFI PSIAGERKLV ASLDCKQLTQ VHGVADIIVH 


ESQ 

« Hide

References

« Hide 'large scale' references
[1]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000012174.
[2]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000012174.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL929335 Genomic DNA. No translation available.
RefSeqXP_694950.3. XM_689858.5.
UniGeneDr.155825.
Dr.78708.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000027444; ENSDARP00000012174; ENSDARG00000012130.
GeneID566581.
KEGGdre:566581.

Organism-specific databases

CTD566581.
ZFINZDB-GENE-060503-139. tgm1l1.

Phylogenomic databases

GeneTreeENSGT00740000115156.
KOK05619.

Gene expression databases

BgeeE9QB19.

Family and domain databases

Gene3D2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERPTHR11590. PTHR11590. 1 hit.
PfamPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFPIRSF000459. TGM_EBP42. 1 hit.
SMARTSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20888264.

Entry information

Entry nameE9QB19_DANRE
AccessionPrimary (citable) accession number: E9QB19
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)