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E9QB19

- E9QB19_DANRE

UniProt

E9QB19 - E9QB19_DANRE

Protein
Submitted name:

Uncharacterized protein

Gene

tgm1l1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 calcium ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei369 – 3691UniRule annotation
    Active sitei428 – 4281UniRule annotation
    Active sitei451 – 4511UniRule annotation
    Metal bindingi491 – 4911CalciumUniRule annotation
    Metal bindingi493 – 4931CalciumUniRule annotation
    Metal bindingi540 – 5401CalciumUniRule annotation
    Metal bindingi545 – 5451CalciumUniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

    GO - Biological processi

    1. peptide cross-linking Source: InterPro

    Keywords - Ligandi

    CalciumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:tgm1l1Imported
    Synonyms:si:ch211-9d9.3Imported
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
    ProteomesiUP000000437: Chromosome 2

    Organism-specific databases

    ZFINiZDB-GENE-060503-139. tgm1l1.

    Expressioni

    Gene expression databases

    BgeeiE9QB19.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00740000115156.
    KOiK05619.

    Family and domain databases

    Gene3Di2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view]
    PANTHERiPTHR11590. PTHR11590. 1 hit.
    PfamiPF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
    SMARTiSM00460. TGc. 1 hit.
    [Graphical view]
    SUPFAMiSSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E9QB19-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPGERQSIRD NSAVGRFHGV SARNGEAVAE KPSESKTKKP ESGCRRWLRK    50
    ACPCCLRRQS NSYDLTSEAD GVVAGNEEIE QPASPVSVSV ETNVDDLSLV 100
    VRSVDLLSRK TDRNKKEHHT DQYSGDQLII RRGQTFQIEL ELSRPFNPNT 150
    DKLHLELKTG ALPLVSKGTH IIIPLVEELQ DERWEAKIVE QNLNRAKLSI 200
    NSSVNAVIGK YTLTVVTQCL KTNESTTHDP EKDIYMLFNP WCEDDAVFME 250
    GERELNEYVL NDTGRIYYGT EKQIGARTWN FGQFDEGILE ACLFVLDNSE 300
    VPPSGRGDPV NVVRVISAMI NSPDDRGVLE GNWSGNYTGG TSPTAWSGSV 350
    EILKQYHREG GTPVKYGQCW VFSGVTTTVL RCLGIPARSV TNFQSAHDTD 400
    VSLTTDVYFD EDMEPIHHLN SDSVWNFHVW NDCWLARPDL PPGFGGWQAV 450
    DSTPQETSHG TFRCGPASLA AVRSGQVYLK YDVPFVFAEV NSDKIYWQRN 500
    LDGTFSQIHS EKKAVGHCIS TKAVGSDERV DITDVYKYPE GSEEERIAVE 550
    TACRYGSKPD VYSSAMAEDV QVEVRMEGEG PRMGGDAQLK IVVKNMSSQP 600
    RRTTLHSQAA VMYYTGVLKD TVKKDKLSVE LMPQEEKVIE WTLPYTQYQN 650
    QLVDQAALML TLSGRVSETQ QVLANQTSFR LRTPDLQIEP IGEAYVGKEA 700
    SAKISFTNPL PCTLRNVVVR VEGLGLRDLH PIKVGDVGKH GKVMVTEHFI 750
    PSIAGERKLV ASLDCKQLTQ VHGVADIIVH ESQ 783
    Length:783
    Mass (Da):87,201
    Last modified:April 5, 2011 - v1
    Checksum:i5F5CBD2C291BC3C6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL929335 Genomic DNA. No translation available.
    RefSeqiXP_694950.3. XM_689858.5.
    UniGeneiDr.155825.
    Dr.78708.

    Genome annotation databases

    EnsembliENSDART00000027444; ENSDARP00000012174; ENSDARG00000012130.
    GeneIDi566581.
    KEGGidre:566581.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL929335 Genomic DNA. No translation available.
    RefSeqi XP_694950.3. XM_689858.5.
    UniGenei Dr.155825.
    Dr.78708.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSDART00000027444 ; ENSDARP00000012174 ; ENSDARG00000012130 .
    GeneIDi 566581.
    KEGGi dre:566581.

    Organism-specific databases

    CTDi 566581.
    ZFINi ZDB-GENE-060503-139. tgm1l1.

    Phylogenomic databases

    GeneTreei ENSGT00740000115156.
    KOi K05619.

    Miscellaneous databases

    NextBioi 20888264.

    Gene expression databases

    Bgeei E9QB19.

    Family and domain databases

    Gene3Di 2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view ]
    PANTHERi PTHR11590. PTHR11590. 1 hit.
    Pfami PF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
    SMARTi SM00460. TGc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: TuebingenImported.
    2. "The zebrafish reference genome sequence and its relationship to the human genome."
      Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
      , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
      Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TuebingenImported.

    Entry informationi

    Entry nameiE9QB19_DANRE
    AccessioniPrimary (citable) accession number: E9QB19
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3