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Protein

Transporter

Gene

Slc6a9

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Biological processSymportUniRule annotationSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
TransporterUniRule annotation
Gene namesi
Name:Slc6a9Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:95760 Slc6a9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei41 – 59HelicalSequence analysisAdd BLAST19
Transmembranei71 – 92HelicalSequence analysisAdd BLAST22
Transmembranei113 – 140HelicalSequence analysisAdd BLAST28
Transmembranei220 – 241HelicalSequence analysisAdd BLAST22
Transmembranei253 – 280HelicalSequence analysisAdd BLAST28
Transmembranei300 – 317HelicalSequence analysisAdd BLAST18

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiE9QA02

Expressioni

Gene expression databases

BgeeiENSMUSG00000028542
ExpressionAtlasiE9QA02 baseline and differential

Family & Domainsi

Sequence similaritiesi

Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3659 Eukaryota
COG0733 LUCA
GeneTreeiENSGT00760000118857

Family and domain databases

InterProiView protein in InterPro
IPR000175 Na/ntran_symport
IPR003028 Na/ntran_symport_glycine_GLY1
IPR037272 SNS_sf
PANTHERiPTHR11616 PTHR11616, 1 hit
PfamiView protein in Pfam
PF00209 SNF, 1 hit
PRINTSiPR01204 GLY1TRNSPORT
PR00176 NANEUSMPORT
SUPFAMiSSF161070 SSF161070, 2 hits
PROSITEiView protein in PROSITE
PS00610 NA_NEUROTRAN_SYMP_1, 1 hit
PS00754 NA_NEUROTRAN_SYMP_2, 1 hit
PS50267 NA_NEUROTRAN_SYMP_3, 1 hit

Sequencei

Sequence statusi: Fragment.

E9QA02-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASAQGPVAT PSPEQNGAVP SEATKKDQNL TRGNWGNQIE FVLTSVGYAV
60 70 80 90 100
GLGNVWRFPY LCYRNGGGAF MFPYFIMLIF CGIPLFFMEL SFGQFASQGC
110 120 130 140 150
LGVWRISPMF KGVGYGMMVV STYIGIYYNV VICIAFYYFF SSMTHVLPWA
160 170 180 190 200
YCNNPWNTPD CAGVLDASNL TNGSRPAALS GNLSHLFNYT LQRTSPSEEY
210 220 230 240 250
WRLYVLKLSD DIGNFGEVRL PLLGCLGVSW VVVFLCLIRG VKSSGKVVYF
260 270 280 290 300
TATFPYVVLT ILFVRGVTLE GAFTGIMYYL TPQWDKILEA KVWGDAASQI
310 320
FYSLGCAWGG LITMASYNKF H
Length:321
Mass (Da):35,644
Last modified:April 5, 2011 - v1
Checksum:i7E9DC24AB6BC19A2
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei321Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL627128 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000132043; ENSMUSP00000122676; ENSMUSG00000028542

Similar proteinsi

Entry informationi

Entry nameiE9QA02_MOUSE
AccessioniPrimary (citable) accession number: E9QA02
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 23, 2018
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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