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E9Q9V1

- E9Q9V1_MOUSE

UniProt

E9Q9V1 - E9Q9V1_MOUSE

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Protein
Submitted name:

Protein Arid4a

Gene

Arid4a

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro

GO - Biological processi

  1. erythrocyte development Source: MGI
  2. establishment of Sertoli cell barrier Source: MGI
  3. histone H3-K4 trimethylation Source: MGI
  4. histone H3-K9 trimethylation Source: MGI
  5. histone H4-K20 trimethylation Source: MGI
  6. negative regulation of transcription, DNA-templated Source: Ensembl
  7. positive regulation of transcription from RNA polymerase II promoter Source: MGI
  8. regulation of gene expression by genetic imprinting Source: MGI
  9. spermatogenesis Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Arid4aImported
Gene namesi
Name:Arid4aImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 12

Organism-specific databases

MGIiMGI:2444354. Arid4a.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
  2. transcriptional repressor complex Source: Ensembl
Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Expressioni

Gene expression databases

BgeeiE9Q9V1.
ExpressionAtlasiE9Q9V1. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliE9Q9V1.
SMRiE9Q9V1. Positions 1-85.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains ARID domain.SAAS annotation

Phylogenomic databases

GeneTreeiENSGT00510000046413.

Family and domain databases

Gene3Di1.10.150.60. 1 hit.
InterProiIPR001606. ARID/BRIGHT_DNA-bd.
IPR000953. Chromo_domain/shadow.
IPR016197. Chromodomain-like.
IPR025995. Tudor-knot.
[Graphical view]
PfamiPF01388. ARID. 1 hit.
PF11717. Tudor-knot. 1 hit.
[Graphical view]
SMARTiSM00501. BRIGHT. 1 hit.
SM00298. CHROMO. 1 hit.
[Graphical view]
SUPFAMiSSF46774. SSF46774. 1 hit.
SSF54160. SSF54160. 1 hit.
PROSITEiPS51011. ARID. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

E9Q9V1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEDRGTPINK PPVLGYKDLN LFKLFRLVYH QGGCGNIDSG AVWKQIYMDL
60 70 80 90 100
GIPILNSAAS YNVKTAYRKY LYGFEEYCRS ANIQFRTIHH HEPKVKEEKK
110 120 130 140 150
DFEDSMDEAL KEAPEMPLLD VKSEPEENTD SNSESDREDT ELKSPRGRRK
160 170 180 190 200
IVRDANCIKK EIEEEKIEDK FLRDDLENKD AGDDDDDGDP AAKREHELLF
210 220 230 240 250
GRKSTPKNKE KKIKKPEDSE RDSDEEEEKS QEREETESRC DSEGEDEEDD
260 270 280 290 300
TEPCLTGTKV KVKYGRGKTQ KIYEASIKST EMDDGEILYL VHYYGWNVRY
310 320 330 340 350
DEWVKADRII WPLDKGGPKK KQKKKVKNKE DSEKDEKRDE ERQKSKRGRP
360 370 380 390 400
PLKSTFSPNM PYSLSKTSNS EGKSDSCSSD SEADDQLEKS SGGEDLSPDV
410 420 430 440 450
KEELEKNENA HDDKLDEENP KIVHISKEND RTQAQPSDTL TVEAGDSDQI
460 470 480 490 500
VHIFGDKVDQ VEEFKKQVEK SPKGKGRRSK TKDLSLELIK ISPFGQEEAG
510 520 530
SEAHGDVHSL EFSSLECKNF SSTEDDIDPY E
Length:531
Mass (Da):60,865
Last modified:April 5, 2011 - v1
Checksum:iD919ECCBD3F5CC27
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei531 – 5311Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC112794 Genomic DNA. No translation available.
AC132325 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000135709; ENSMUSP00000121319; ENSMUSG00000048118.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC112794 Genomic DNA. No translation available.
AC132325 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali E9Q9V1.
SMRi E9Q9V1. Positions 1-85.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000135709 ; ENSMUSP00000121319 ; ENSMUSG00000048118 .

Organism-specific databases

MGIi MGI:2444354. Arid4a.

Phylogenomic databases

GeneTreei ENSGT00510000046413.

Miscellaneous databases

NextBioi 35555802.
SOURCEi Search...

Gene expression databases

Bgeei E9Q9V1.
ExpressionAtlasi E9Q9V1. baseline and differential.

Family and domain databases

Gene3Di 1.10.150.60. 1 hit.
InterProi IPR001606. ARID/BRIGHT_DNA-bd.
IPR000953. Chromo_domain/shadow.
IPR016197. Chromodomain-like.
IPR025995. Tudor-knot.
[Graphical view ]
Pfami PF01388. ARID. 1 hit.
PF11717. Tudor-knot. 1 hit.
[Graphical view ]
SMARTi SM00501. BRIGHT. 1 hit.
SM00298. CHROMO. 1 hit.
[Graphical view ]
SUPFAMi SSF46774. SSF46774. 1 hit.
SSF54160. SSF54160. 1 hit.
PROSITEi PS51011. ARID. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9Q9V1_MOUSE
AccessioniPrimary (citable) accession number: E9Q9V1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 29, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3