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E9Q9V1

- E9Q9V1_MOUSE

UniProt

E9Q9V1 - E9Q9V1_MOUSE

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Protein
Submitted name:

Protein Arid4a

Gene
Arid4a
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro

GO - Biological processi

  1. erythrocyte development Source: MGI
  2. histone H3-K4 trimethylation Source: MGI
  3. histone H3-K9 trimethylation Source: MGI
  4. histone H4-K20 trimethylation Source: MGI
  5. negative regulation of transcription, DNA-templated Source: Ensembl
  6. regulation of gene expression by genetic imprinting Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Arid4aImported
Gene namesi
Name:Arid4aImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 12

Organism-specific databases

MGIiMGI:2444354. Arid4a.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
  2. transcriptional repressor complex Source: Ensembl
Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotations

Expressioni

Gene expression databases

ArrayExpressiE9Q9V1.
BgeeiE9Q9V1.

Structurei

3D structure databases

ProteinModelPortaliE9Q9V1.
SMRiE9Q9V1. Positions 1-85.

Family & Domainsi

Sequence similaritiesi

Contains ARID domain.SAAS annotations

Phylogenomic databases

GeneTreeiENSGT00510000046413.

Family and domain databases

Gene3Di1.10.150.60. 1 hit.
InterProiIPR001606. ARID/BRIGHT_DNA-bd.
IPR000953. Chromo_domain/shadow.
IPR016197. Chromodomain-like.
IPR025995. Tudor-knot.
[Graphical view]
PfamiPF01388. ARID. 1 hit.
PF11717. Tudor-knot. 1 hit.
[Graphical view]
SMARTiSM00501. BRIGHT. 1 hit.
SM00298. CHROMO. 1 hit.
[Graphical view]
SUPFAMiSSF46774. SSF46774. 1 hit.
SSF54160. SSF54160. 1 hit.
PROSITEiPS51011. ARID. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

E9Q9V1-1 [UniParc]FASTAAdd to Basket

« Hide

MEDRGTPINK PPVLGYKDLN LFKLFRLVYH QGGCGNIDSG AVWKQIYMDL    50
GIPILNSAAS YNVKTAYRKY LYGFEEYCRS ANIQFRTIHH HEPKVKEEKK 100
DFEDSMDEAL KEAPEMPLLD VKSEPEENTD SNSESDREDT ELKSPRGRRK 150
IVRDANCIKK EIEEEKIEDK FLRDDLENKD AGDDDDDGDP AAKREHELLF 200
GRKSTPKNKE KKIKKPEDSE RDSDEEEEKS QEREETESRC DSEGEDEEDD 250
TEPCLTGTKV KVKYGRGKTQ KIYEASIKST EMDDGEILYL VHYYGWNVRY 300
DEWVKADRII WPLDKGGPKK KQKKKVKNKE DSEKDEKRDE ERQKSKRGRP 350
PLKSTFSPNM PYSLSKTSNS EGKSDSCSSD SEADDQLEKS SGGEDLSPDV 400
KEELEKNENA HDDKLDEENP KIVHISKEND RTQAQPSDTL TVEAGDSDQI 450
VHIFGDKVDQ VEEFKKQVEK SPKGKGRRSK TKDLSLELIK ISPFGQEEAG 500
SEAHGDVHSL EFSSLECKNF SSTEDDIDPY E 531
Length:531
Mass (Da):60,865
Last modified:April 5, 2011 - v1
Checksum:iD919ECCBD3F5CC27
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei531 – 5311Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC112794 Genomic DNA. No translation available.
AC132325 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000135709; ENSMUSP00000121319; ENSMUSG00000048118.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC112794 Genomic DNA. No translation available.
AC132325 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali E9Q9V1.
SMRi E9Q9V1. Positions 1-85.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000135709 ; ENSMUSP00000121319 ; ENSMUSG00000048118 .

Organism-specific databases

MGIi MGI:2444354. Arid4a.

Phylogenomic databases

GeneTreei ENSGT00510000046413.

Miscellaneous databases

NextBioi 35555802.
SOURCEi Search...

Gene expression databases

ArrayExpressi E9Q9V1.
Bgeei E9Q9V1.

Family and domain databases

Gene3Di 1.10.150.60. 1 hit.
InterProi IPR001606. ARID/BRIGHT_DNA-bd.
IPR000953. Chromo_domain/shadow.
IPR016197. Chromodomain-like.
IPR025995. Tudor-knot.
[Graphical view ]
Pfami PF01388. ARID. 1 hit.
PF11717. Tudor-knot. 1 hit.
[Graphical view ]
SMARTi SM00501. BRIGHT. 1 hit.
SM00298. CHROMO. 1 hit.
[Graphical view ]
SUPFAMi SSF46774. SSF46774. 1 hit.
SSF54160. SSF54160. 1 hit.
PROSITEi PS51011. ARID. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9Q9V1_MOUSE
AccessioniPrimary (citable) accession number: E9Q9V1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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