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Protein
Submitted name:

Splicing factor 1

Gene

Sf1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Splicing factor 1Imported
Gene namesi
Name:Sf1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 19

Organism-specific databases

MGIiMGI:1095403. Sf1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiE9Q4Q2.
PaxDbiE9Q4Q2.
PeptideAtlasiE9Q4Q2.
PRIDEiE9Q4Q2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000024949.
ExpressionAtlasiE9Q4Q2. baseline and differential.
GenevisibleiE9Q4Q2. MM.

Structurei

3D structure databases

ProteinModelPortaliE9Q4Q2.
SMRiE9Q4Q2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini279 – 293CCHC-typeInterPro annotationAdd BLAST15

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0119. Eukaryota.
COG5176. LUCA.
GeneTreeiENSGT00550000074434.

Family and domain databases

Gene3Di3.30.1370.10. 1 hit.
4.10.60.10. 1 hit.
InterProiView protein in InterPro
IPR031150. BBP/SF1.
IPR004087. KH_dom.
IPR004088. KH_dom_type_1.
IPR036612. KH_dom_type_1_sf.
IPR032570. SF1-HH.
IPR001878. Znf_CCHC.
IPR036875. Znf_CCHC_sf.
PANTHERiPTHR11208:SF45. PTHR11208:SF45. 2 hits.
PfamiView protein in Pfam
PF00013. KH_1. 1 hit.
PF16275. SF1-HH. 1 hit.
PF00098. zf-CCHC. 1 hit.
SMARTiView protein in SMART
SM00322. KH. 1 hit.
SM00343. ZnF_C2HC. 1 hit.
SUPFAMiSSF54791. SSF54791. 1 hit.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 1 hit.

Sequencei

Sequence statusi: Complete.

E9Q4Q2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATGANATPL DFPSKKRKRS RWNQDTMEQK TVIPGMPTVI PPGLTREQER
60 70 80 90 100
AYIVQLQIED LTRKLRTGDL GIPPNPEDRS PSPEPIYNSE GKRLNTREFR
110 120 130 140 150
TRKKLEEERH TLITEMVALN PDFKPPADYK PPATRVSDKV MIPQDEYPEI
160 170 180 190 200
NFVGLLIGPR GNTLKNIEKE CNAKIMIRGK GSVKEGKVGR KDGQMLPGED
210 220 230 240 250
EPLHALVTAN TMENVKKAVE QIRNILKQGI ETPEDQNDLR KMQLRELARL
260 270 280 290 300
NGTLREDDNR ILRPWQSSET RSITNTTVCT KCGGAGHIAS DCKFQRPGDP
310 320 330 340 350
QSAQDKARMD KEYLSLMAEL GEAPVPASVG STSGPATTPL ASAPRPAAPA
360 370 380 390 400
SNPPPPSLMS TTQSRPPWMN SGPSENRPYH GMHGGGPGGP GGGPHSFPHP
410 420 430 440 450
LPSLTGGHGG HPMQHNPNGP PPPWMQPPPP PMNQGPHPPG HHGPPPMDQY
460 470 480 490 500
LGSTPVGSGV YRLHQGKGMM PPPPMGMMPP PPPPPSGQPP PPPSGPLPPW
510 520 530 540
QQQQQQPPPP PPPSSSMASS TPLPWQQRSL PAAAMARAMR VRTFRAHW
Length:548
Mass (Da):59,699
Last modified:April 5, 2011 - v1
Checksum:i8965858D98119170
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC127556 Genomic DNA. No translation available.
AC167245 Genomic DNA. No translation available.
RefSeqiNP_035880.2. NM_011750.2.
UniGeneiMm.256422.
Mm.453047.

Genome annotation databases

EnsembliENSMUST00000113487; ENSMUSP00000109115; ENSMUSG00000024949.
GeneIDi22668.
UCSCiuc008gim.2. mouse.

Similar proteinsi

Entry informationi

Entry nameiE9Q4Q2_MOUSE
AccessioniPrimary (citable) accession number: E9Q4Q2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 25, 2017
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported