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E9Q4N6

- E9Q4N6_MOUSE

UniProt

E9Q4N6 - E9Q4N6_MOUSE

Protein
Submitted name:

Protein Arid1b

Gene

Arid1b

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro

    GO - Biological processi

    1. chromatin remodeling Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Arid1bImported
    Gene namesi
    Name:Arid1bImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 17

    Organism-specific databases

    MGIiMGI:1926129. Arid1b.

    Subcellular locationi

    GO - Cellular componenti

    1. nBAF complex Source: MGI

    Keywords - Cellular componenti

    NucleusSAAS annotation

    PTM / Processingi

    Proteomic databases

    PRIDEiE9Q4N6.

    Expressioni

    Gene expression databases

    ArrayExpressiE9Q4N6.
    BgeeiE9Q4N6.

    Structurei

    3D structure databases

    ProteinModelPortaliE9Q4N6.
    SMRiE9Q4N6. Positions 567-680.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains ARID domain.SAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00550000074575.

    Family and domain databases

    Gene3Di1.10.150.60. 1 hit.
    1.25.10.10. 1 hit.
    InterProiIPR001606. ARID/BRIGHT_DNA-bd.
    IPR011989. ARM-like.
    IPR016024. ARM-type_fold.
    IPR021906. DUF3518.
    [Graphical view]
    PfamiPF01388. ARID. 1 hit.
    PF12031. DUF3518. 1 hit.
    [Graphical view]
    SMARTiSM00501. BRIGHT. 1 hit.
    [Graphical view]
    SUPFAMiSSF46774. SSF46774. 1 hit.
    SSF48371. SSF48371. 1 hit.
    PROSITEiPS51011. ARID. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E9Q4N6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSPGTPGPTM GRSQGSPMDP MVMKRPQLYG MGTHPHSQPQ QSSPYPGGSY     50
    GPPGAQRYPL GMQGRAPGAL GGLQYPQQQM PPQYGQQAVS GYCQQGQQPY 100
    YNQQPQPSHL PPQAQYLQPA AAQSQQRYQP QQDMSQEGYG TRSQPPLAPG 150
    KSNHEDLNLI QQERPSSLPD LSGSIDDLPT GTEATLSSAV SASGSTSSQG 200
    DQSNPAQSPF SPHASPHLSS IPGGPSPSPV GSPVGSNQSR SGPISPASIP 250
    GFMTGTQRNP QMSQYGPQQT GPSMSPHPSP GGQMHPGISN FQQSNSSGTY 300
    GPQMSQYGPQ GNYSRTPTYS GVPSASYSGP GPGMGINANN QMHGQGPAQP 350
    CGAMPLGRMP SAGMQNRPFP GTMSSVTPSS PGMSQQGGPG MGPPMPTVNR 400
    KAQEAAAAVM QAAANSAQSR QGSFPGMNQS GLVASSSPYS QSMNNNSSLM 450
    STQAQPYSMT PTMVNSSTAS MGLADMMSPS ESKLSVPLKA DGKEEGVSQP 500
    ESKSKDSYGS QGISQPPTPG NLPVPSPMSP SSASISSFHG DESDSISSPG 550
    WPKTPSSPKS SSSSTTGEKI TKVYELGNEP ERKLWVDRYL TFMEERGSPV 600
    SSLPAVGKKP LDLFRLYVCV KEIGGLAQVN KNKKWRELAT NLNVGTSSSA 650
    ASSLKKQYIQ YLFAFECKTE RGEEPPPEVF STGDSKKQPK LQPPSPANSG 700
    SLQGPQTPQS TGSNSMAEVP GDLKPPTPAS TPHGQMTPMQ SGRSSTVSVH 750
    DPFSDVSDSA YPKRNSMTPN APYQQGMGMP DMMGRMPYEP NKDPFSGMRK 800
    VPGSSEPFMT QGQVPNSGMQ DMYNQSPSGA MSNLGMGQRQ QFPYGTSYDR 850
    RHEAYGQQYP GQGPPTGQPP YGGHQPGLYP QQPNYKRHMD GMYGPPAKRH 900
    EGDMYNMQYG SQQQEMYNQY GGSYSGPDRR PIQGQYPYPY NRERMQGPGQ 950
    MQPHGIPPQM MGGPMQSSSS EGPQQNMWAT RNDMPYPYQS RQGPGGPAQA 1000
    PPYPGMNRTD DMMVPEQRIN HESQWPSHVS QRQPYMSSSA SMQPITRPPQ 1050
    SSYQTPPSLP NHISRAPSPA SFQRSLESRM SPSKSPFLPT MKMQKVMPTV 1100
    PTSQVTGPPP QPPPIRREIT FPPGSVEASQ PILKQRRKIT SKDIVTPEAW 1150
    RVMMSLKSGL LAESTWALDT INILLYDDST VATFNLSQLS GFLELLVEYF 1200
    RKCLIDIFGI LMEYEVGDPS QKALDHRSGK KDDSQSLEDD SGKEDDDAEC 1250
    LVEEEEEEEE EEEDSEKIES EGKSSPALAA PDASVDPKET PKQASKFDKL 1300
    PIKIVKKNKL FVVDRSDKLG RVQEFSSGLL HWQLGGGDTT EHIQTHFESK 1350
    MEIPPRRRPP PPLSSTGKKK ELEGKGDSEE QPEKSIIATI DDVLSARPGA 1400
    LPEDTNPGPQ TDSGKFPFGI QQAKSHRNIR LLEDEPRSRD ETPLCTIAHW 1450
    QDSLAKRCIC VSNIVRSLSF VPGNDAEMSK HPGLVLILGK LILLHHEHPE 1500
    RKRAPQTYEK EEDEDKGVAC SKDEWWWDCL EVLRDNTLVT LANISGQLDL 1550
    SAYTESICLP ILDGLLHWMV CPSAEAQDPF PTVGPNSVLS PQRLVLETLC 1600
    KLSIQDNNVD LILATPPFSR QEKFYATLVR YVGDRKNPVC REMSMALLSN 1650
    LAQGDTLAAR AIAVQKGSIG NLISFLEDGV TMAQYQQSQH NLMHMQPPPL 1700
    EPPSVDMMCR AAKALLAMAR VDENRSEFLL HEGRLLDISI SAVLNSLVAS 1750
    VICDVLFQIG QL 1762
    Length:1,762
    Mass (Da):191,227
    Last modified:April 5, 2011 - v1
    Checksum:i7A9E9491EF2013E5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC126929 Genomic DNA. No translation available.
    AC132611 Genomic DNA. No translation available.
    AC166064 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSMUST00000115799; ENSMUSP00000111465; ENSMUSG00000069729.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC126929 Genomic DNA. No translation available.
    AC132611 Genomic DNA. No translation available.
    AC166064 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali E9Q4N6.
    SMRi E9Q4N6. Positions 567-680.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi E9Q4N6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000115799 ; ENSMUSP00000111465 ; ENSMUSG00000069729 .

    Organism-specific databases

    MGIi MGI:1926129. Arid1b.

    Phylogenomic databases

    GeneTreei ENSGT00550000074575.

    Miscellaneous databases

    ChiTaRSi ARID1B. mouse.
    NextBioi 35555137.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi E9Q4N6.
    Bgeei E9Q4N6.

    Family and domain databases

    Gene3Di 1.10.150.60. 1 hit.
    1.25.10.10. 1 hit.
    InterProi IPR001606. ARID/BRIGHT_DNA-bd.
    IPR011989. ARM-like.
    IPR016024. ARM-type_fold.
    IPR021906. DUF3518.
    [Graphical view ]
    Pfami PF01388. ARID. 1 hit.
    PF12031. DUF3518. 1 hit.
    [Graphical view ]
    SMARTi SM00501. BRIGHT. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46774. SSF46774. 1 hit.
    SSF48371. SSF48371. 1 hit.
    PROSITEi PS51011. ARID. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    2. Ensembl
      Submitted (MAY-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiE9Q4N6_MOUSE
    AccessioniPrimary (citable) accession number: E9Q4N6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3