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E9Q4N6

- E9Q4N6_MOUSE

UniProt

E9Q4N6 - E9Q4N6_MOUSE

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Protein
Submitted name: Protein Arid1b
Gene
Arid1b
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Arid1bImported
Gene namesi
Name:Arid1bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 17

Organism-specific databases

MGIiMGI:1926129. Arid1b.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotations

PTM / Processingi

Proteomic databases

PRIDEiE9Q4N6.

Expressioni

Gene expression databases

ArrayExpressiE9Q4N6.
BgeeiE9Q4N6.

Structurei

3D structure databases

ProteinModelPortaliE9Q4N6.
SMRiE9Q4N6. Positions 567-680.

Family & Domainsi

Sequence similaritiesi

Contains ARID domain.SAAS annotations

Phylogenomic databases

GeneTreeiENSGT00550000074575.

Family and domain databases

Gene3Di1.10.150.60. 1 hit.
1.25.10.10. 1 hit.
InterProiIPR001606. ARID/BRIGHT_DNA-bd.
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR021906. DUF3518.
[Graphical view]
PfamiPF01388. ARID. 1 hit.
PF12031. DUF3518. 1 hit.
[Graphical view]
SMARTiSM00501. BRIGHT. 1 hit.
[Graphical view]
SUPFAMiSSF46774. SSF46774. 1 hit.
SSF48371. SSF48371. 1 hit.
PROSITEiPS51011. ARID. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9Q4N6-1 [UniParc]FASTAAdd to Basket

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MSPGTPGPTM GRSQGSPMDP MVMKRPQLYG MGTHPHSQPQ QSSPYPGGSY     50
GPPGAQRYPL GMQGRAPGAL GGLQYPQQQM PPQYGQQAVS GYCQQGQQPY 100
YNQQPQPSHL PPQAQYLQPA AAQSQQRYQP QQDMSQEGYG TRSQPPLAPG 150
KSNHEDLNLI QQERPSSLPD LSGSIDDLPT GTEATLSSAV SASGSTSSQG 200
DQSNPAQSPF SPHASPHLSS IPGGPSPSPV GSPVGSNQSR SGPISPASIP 250
GFMTGTQRNP QMSQYGPQQT GPSMSPHPSP GGQMHPGISN FQQSNSSGTY 300
GPQMSQYGPQ GNYSRTPTYS GVPSASYSGP GPGMGINANN QMHGQGPAQP 350
CGAMPLGRMP SAGMQNRPFP GTMSSVTPSS PGMSQQGGPG MGPPMPTVNR 400
KAQEAAAAVM QAAANSAQSR QGSFPGMNQS GLVASSSPYS QSMNNNSSLM 450
STQAQPYSMT PTMVNSSTAS MGLADMMSPS ESKLSVPLKA DGKEEGVSQP 500
ESKSKDSYGS QGISQPPTPG NLPVPSPMSP SSASISSFHG DESDSISSPG 550
WPKTPSSPKS SSSSTTGEKI TKVYELGNEP ERKLWVDRYL TFMEERGSPV 600
SSLPAVGKKP LDLFRLYVCV KEIGGLAQVN KNKKWRELAT NLNVGTSSSA 650
ASSLKKQYIQ YLFAFECKTE RGEEPPPEVF STGDSKKQPK LQPPSPANSG 700
SLQGPQTPQS TGSNSMAEVP GDLKPPTPAS TPHGQMTPMQ SGRSSTVSVH 750
DPFSDVSDSA YPKRNSMTPN APYQQGMGMP DMMGRMPYEP NKDPFSGMRK 800
VPGSSEPFMT QGQVPNSGMQ DMYNQSPSGA MSNLGMGQRQ QFPYGTSYDR 850
RHEAYGQQYP GQGPPTGQPP YGGHQPGLYP QQPNYKRHMD GMYGPPAKRH 900
EGDMYNMQYG SQQQEMYNQY GGSYSGPDRR PIQGQYPYPY NRERMQGPGQ 950
MQPHGIPPQM MGGPMQSSSS EGPQQNMWAT RNDMPYPYQS RQGPGGPAQA 1000
PPYPGMNRTD DMMVPEQRIN HESQWPSHVS QRQPYMSSSA SMQPITRPPQ 1050
SSYQTPPSLP NHISRAPSPA SFQRSLESRM SPSKSPFLPT MKMQKVMPTV 1100
PTSQVTGPPP QPPPIRREIT FPPGSVEASQ PILKQRRKIT SKDIVTPEAW 1150
RVMMSLKSGL LAESTWALDT INILLYDDST VATFNLSQLS GFLELLVEYF 1200
RKCLIDIFGI LMEYEVGDPS QKALDHRSGK KDDSQSLEDD SGKEDDDAEC 1250
LVEEEEEEEE EEEDSEKIES EGKSSPALAA PDASVDPKET PKQASKFDKL 1300
PIKIVKKNKL FVVDRSDKLG RVQEFSSGLL HWQLGGGDTT EHIQTHFESK 1350
MEIPPRRRPP PPLSSTGKKK ELEGKGDSEE QPEKSIIATI DDVLSARPGA 1400
LPEDTNPGPQ TDSGKFPFGI QQAKSHRNIR LLEDEPRSRD ETPLCTIAHW 1450
QDSLAKRCIC VSNIVRSLSF VPGNDAEMSK HPGLVLILGK LILLHHEHPE 1500
RKRAPQTYEK EEDEDKGVAC SKDEWWWDCL EVLRDNTLVT LANISGQLDL 1550
SAYTESICLP ILDGLLHWMV CPSAEAQDPF PTVGPNSVLS PQRLVLETLC 1600
KLSIQDNNVD LILATPPFSR QEKFYATLVR YVGDRKNPVC REMSMALLSN 1650
LAQGDTLAAR AIAVQKGSIG NLISFLEDGV TMAQYQQSQH NLMHMQPPPL 1700
EPPSVDMMCR AAKALLAMAR VDENRSEFLL HEGRLLDISI SAVLNSLVAS 1750
VICDVLFQIG QL 1762
Length:1,762
Mass (Da):191,227
Last modified:April 5, 2011 - v1
Checksum:i7A9E9491EF2013E5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC126929 Genomic DNA. No translation available.
AC132611 Genomic DNA. No translation available.
AC166064 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000115799; ENSMUSP00000111465; ENSMUSG00000069729.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC126929 Genomic DNA. No translation available.
AC132611 Genomic DNA. No translation available.
AC166064 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali E9Q4N6.
SMRi E9Q4N6. Positions 567-680.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi E9Q4N6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000115799 ; ENSMUSP00000111465 ; ENSMUSG00000069729 .

Organism-specific databases

MGIi MGI:1926129. Arid1b.

Phylogenomic databases

GeneTreei ENSGT00550000074575.

Miscellaneous databases

ChiTaRSi ARID1B. mouse.
NextBioi 35555137.
SOURCEi Search...

Gene expression databases

ArrayExpressi E9Q4N6.
Bgeei E9Q4N6.

Family and domain databases

Gene3Di 1.10.150.60. 1 hit.
1.25.10.10. 1 hit.
InterProi IPR001606. ARID/BRIGHT_DNA-bd.
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR021906. DUF3518.
[Graphical view ]
Pfami PF01388. ARID. 1 hit.
PF12031. DUF3518. 1 hit.
[Graphical view ]
SMARTi SM00501. BRIGHT. 1 hit.
[Graphical view ]
SUPFAMi SSF46774. SSF46774. 1 hit.
SSF48371. SSF48371. 1 hit.
PROSITEi PS51011. ARID. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9Q4N6_MOUSE
AccessioniPrimary (citable) accession number: E9Q4N6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi