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Protein
Submitted name:

Homer protein homolog 2

Gene

Homer2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Homer protein homolog 2Imported
Gene namesi
Name:Homer2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1347354. Homer2.

PTM / Processingi

Proteomic databases

PaxDbiE9Q4F9.
PeptideAtlasiE9Q4F9.

Expressioni

Gene expression databases

BgeeiE9Q4F9.
ExpressionAtlasiE9Q4F9. baseline and differential.
GenevisibleiE9Q4F9. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000026922.

Structurei

3D structure databases

ProteinModelPortaliE9Q4F9.
SMRiE9Q4F9. Positions 1-47.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 4646WH1InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili109 – 13628Sequence analysisAdd
BLAST
Coiled coili151 – 20959Sequence analysisAdd
BLAST
Coiled coili220 – 25435Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IGRQ. Eukaryota.
ENOG410XQWT. LUCA.
GeneTreeiENSGT00390000017850.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR011993. PH_dom-like.
IPR000697. WH1/EVH1_dom.
[Graphical view]
PfamiPF00568. WH1. 1 hit.
[Graphical view]
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiPS50229. WH1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9Q4F9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTFTKTSQKF GQWADSRANT VFGLGFSSEL QLTKFAEKFQ EVREAARLAR
60 70 80 90 100
DKSQEKTETS SNHSQESGCE TPSSTQASSV NGTDDEKASH ASPADTHLKS
110 120 130 140 150
ENDKLKIALT QSAANVKKWE MELQTLRESN ARLTTALQES AASVEQWKRQ
160 170 180 190 200
FSICRDENDR LRSKIEELEE QCSEINREKE KNTQLKRRIE ELESEVRDKE
210 220 230 240 250
MELKDLRKQS EIIPQLMSEC EYVSEKLEAA ERDNQNLEDK VRSLKTDIEE
260 270 280 290
SKYRQRHLKG ELKSFLEVLD GKIDDLHDFR RGLSKLGTDN
Length:290
Mass (Da):33,385
Last modified:April 5, 2011 - v1
Checksum:i763B9E5B4DFD73FA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC130538 Genomic DNA. No translation available.
AC140366 Genomic DNA. No translation available.
RefSeqiNP_001157559.1. NM_001164087.1.
XP_006540972.1. XM_006540909.1.
UniGeneiMm.228.

Genome annotation databases

EnsembliENSMUST00000098326; ENSMUSP00000095931; ENSMUSG00000025813.
GeneIDi26557.
UCSCiuc009icj.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC130538 Genomic DNA. No translation available.
AC140366 Genomic DNA. No translation available.
RefSeqiNP_001157559.1. NM_001164087.1.
XP_006540972.1. XM_006540909.1.
UniGeneiMm.228.

3D structure databases

ProteinModelPortaliE9Q4F9.
SMRiE9Q4F9. Positions 1-47.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000026922.

Proteomic databases

PaxDbiE9Q4F9.
PeptideAtlasiE9Q4F9.

Protocols and materials databases

DNASUi26557.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000098326; ENSMUSP00000095931; ENSMUSG00000025813.
GeneIDi26557.
UCSCiuc009icj.2. mouse.

Organism-specific databases

CTDi9455.
MGIiMGI:1347354. Homer2.

Phylogenomic databases

eggNOGiENOG410IGRQ. Eukaryota.
ENOG410XQWT. LUCA.
GeneTreeiENSGT00390000017850.

Miscellaneous databases

ChiTaRSiHomer2. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiE9Q4F9.
ExpressionAtlasiE9Q4F9. baseline and differential.
GenevisibleiE9Q4F9. MM.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR011993. PH_dom-like.
IPR000697. WH1/EVH1_dom.
[Graphical view]
PfamiPF00568. WH1. 1 hit.
[Graphical view]
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiPS50229. WH1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9Q4F9_MOUSE
AccessioniPrimary (citable) accession number: E9Q4F9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 6, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.