E9Q456 (E9Q456_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Tropomyosin alpha-1 chain Ensembl ENSMUSP00000109314

Gene names

Name:

Tpm1 Ensembl ENSMUSP00000109314 MGI 98809

Organism

Mus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000109314

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	248 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities	Belongs to the tropomyosin family. RuleBase RU004515
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000109314

Ontologies

Keywords
Domain	Coiled coil SAAS SAAS000533
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	in utero embryonic development Inferred from mutant phenotype PubMed 9440710. Source: MGI
Cellular_component	muscle thin filament tropomyosin Traceable author statement PubMed 8618961. Source: MGI
Molecular_function	structural constituent of cytoskeleton Traceable author statement PubMed 8618961. Source: MGI
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E9Q456 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: 35EBB83B08E2985C	FASTA	248	28,668
	10 20 30 40 50 60 MAGSSSLEAV RRKIRSLQEQ ADAAEERAGS LQRELDQERK LRETAEADVA SLNRRIQLVE 70 80 90 100 110 120 EELDRAQERL ATALQKLEEA EKAADESERG MKVIESRAQK DEEKMEIQEI QLKEAKHIAE 130 140 150 160 170 180 DADRKYEEVA RKLVIIESDL ERAEERAELS EGQVRQLEEQ LRIMDQTLKA LMAAEDKYSQ 190 200 210 220 230 240 KEDKYEEEIK VLSDKLKEAE TRAEFAERSV TKLEKSIDDL EDELYAQKLK YKAISEELDH ALNDMTSI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P. PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J Ensembl ENSMUSP00000109314.
[2]	Ensembl Submitted (MAY-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: C57BL/6J Ensembl ENSMUSP00000109314.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC166370 Genomic DNA. No translation available.
IPI	IPI00831423.
3D structure databases
ProteinModelPortal	E9Q456.
SMR	E9Q456. Positions 7-248.
ModBase	Search...
Proteomic databases
PRIDE	E9Q456.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSMUST00000113684; ENSMUSP00000109314; ENSMUSG00000032366.
Organism-specific databases
MGI	MGI:98809. Tpm1.
Phylogenomic databases
GeneTree	ENSGT00550000074494.
Gene expression databases
ArrayExpress	E9Q456.
Bgee	E9Q456.
Family and domain databases
InterPro	IPR000533. Tropomyosin. [Graphical view]
Pfam	PF00261. Tropomyosin. 1 hit. [Graphical view]
PRINTS	PR00194. TROPOMYOSIN.
PROSITE	PS00326. TROPOMYOSIN. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	TPM1. mouse.
NextBio	35555075.
SOURCE	Search...

Entry information

Entry name

E9Q456_MOUSE

Accession

Primary (citable) accession number: E9Q456

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)