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Protein

Transporter

Gene

Slc6a9

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

SymportUniRule annotationSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
TransporterUniRule annotation
Gene namesi
Name:Slc6a9Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:95760. Slc6a9.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei93 – 111HelicalSequence analysisAdd BLAST19
Transmembranei123 – 144HelicalSequence analysisAdd BLAST22
Transmembranei165 – 192HelicalSequence analysisAdd BLAST28
Transmembranei272 – 293HelicalSequence analysisAdd BLAST22
Transmembranei305 – 332HelicalSequence analysisAdd BLAST28
Transmembranei352 – 369HelicalSequence analysisAdd BLAST18

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiE9Q3Z2.
PeptideAtlasiE9Q3Z2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000028542.
ExpressionAtlasiE9Q3Z2. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000030269.

Structurei

3D structure databases

ProteinModelPortaliE9Q3Z2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3659. Eukaryota.
COG0733. LUCA.
GeneTreeiENSGT00760000118857.

Family and domain databases

InterProiIPR000175. Na/ntran_symport.
IPR003028. Na/ntran_symport_glycine_GLY1.
[Graphical view]
PANTHERiPTHR11616. PTHR11616. 1 hit.
PfamiPF00209. SNF. 1 hit.
[Graphical view]
PRINTSiPR01204. GLY1TRNSPORT.
PR00176. NANEUSMPORT.
PROSITEiPS00610. NA_NEUROTRAN_SYMP_1. 1 hit.
PS00754. NA_NEUROTRAN_SYMP_2. 1 hit.
PS50267. NA_NEUROTRAN_SYMP_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

E9Q3Z2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASAQGPVAT PSPEQGFICR PPSHSVTPFP GTTSVSFSQA CPQSLARCPQ
60 70 80 90 100
LWSPVLTHSP ASPAMAQNGA VPSEATKKDQ NLTRGNWGNQ IEFVLTSVGY
110 120 130 140 150
AVGLGNVWRF PYLCYRNGGG AFMFPYFIML IFCGIPLFFM ELSFGQFASQ
160 170 180 190 200
GCLGVWRISP MFKGVGYGMM VVSTYIGIYY NVVICIAFYY FFSSMTHVLP
210 220 230 240 250
WAYCNNPWNT PDCAGVLDAS NLTNGSRPAA LSGNLSHLFN YTLQRTSPSE
260 270 280 290 300
EYWRLYVLKL SDDIGNFGEV RLPLLGCLGV SWVVVFLCLI RGVKSSGKVV
310 320 330 340 350
YFTATFPYVV LTILFVRGVT LEGAFTGIMY YLTPQWDKIL EAKVWGDAAS
360 370
QIFYSLGCAW GGLITMASYN KFH
Length:373
Mass (Da):41,094
Last modified:April 5, 2011 - v1
Checksum:i412B7D3F40EC17E6
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei373Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL627128 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000169990; ENSMUSP00000127203; ENSMUSG00000028542.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL627128 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliE9Q3Z2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000030269.

Proteomic databases

PaxDbiE9Q3Z2.
PeptideAtlasiE9Q3Z2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000169990; ENSMUSP00000127203; ENSMUSG00000028542.

Organism-specific databases

MGIiMGI:95760. Slc6a9.

Phylogenomic databases

eggNOGiKOG3659. Eukaryota.
COG0733. LUCA.
GeneTreeiENSGT00760000118857.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000028542.
ExpressionAtlasiE9Q3Z2. baseline and differential.

Family and domain databases

InterProiIPR000175. Na/ntran_symport.
IPR003028. Na/ntran_symport_glycine_GLY1.
[Graphical view]
PANTHERiPTHR11616. PTHR11616. 1 hit.
PfamiPF00209. SNF. 1 hit.
[Graphical view]
PRINTSiPR01204. GLY1TRNSPORT.
PR00176. NANEUSMPORT.
PROSITEiPS00610. NA_NEUROTRAN_SYMP_1. 1 hit.
PS00754. NA_NEUROTRAN_SYMP_2. 1 hit.
PS50267. NA_NEUROTRAN_SYMP_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiE9Q3Z2_MOUSE
AccessioniPrimary (citable) accession number: E9Q3Z2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: September 7, 2016
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.