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Protein

Transporter

Gene

Slc6a9

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Biological processSymportUniRule annotationSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
TransporterUniRule annotation
Gene namesi
Name:Slc6a9Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:95760 Slc6a9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei93 – 111HelicalSequence analysisAdd BLAST19
Transmembranei123 – 144HelicalSequence analysisAdd BLAST22
Transmembranei165 – 192HelicalSequence analysisAdd BLAST28
Transmembranei272 – 293HelicalSequence analysisAdd BLAST22
Transmembranei305 – 332HelicalSequence analysisAdd BLAST28
Transmembranei352 – 369HelicalSequence analysisAdd BLAST18

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PeptideAtlasiE9Q3Z2

Expressioni

Gene expression databases

BgeeiENSMUSG00000028542
ExpressionAtlasiE9Q3Z2 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliE9Q3Z2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3659 Eukaryota
COG0733 LUCA
GeneTreeiENSGT00760000118857

Family and domain databases

InterProiView protein in InterPro
IPR000175 Na/ntran_symport
IPR003028 Na/ntran_symport_glycine_GLY1
IPR037272 SNS_sf
PANTHERiPTHR11616 PTHR11616, 1 hit
PfamiView protein in Pfam
PF00209 SNF, 1 hit
PRINTSiPR01204 GLY1TRNSPORT
PR00176 NANEUSMPORT
SUPFAMiSSF161070 SSF161070, 2 hits
PROSITEiView protein in PROSITE
PS00610 NA_NEUROTRAN_SYMP_1, 1 hit
PS00754 NA_NEUROTRAN_SYMP_2, 1 hit
PS50267 NA_NEUROTRAN_SYMP_3, 1 hit

Sequencei

Sequence statusi: Fragment.

E9Q3Z2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASAQGPVAT PSPEQGFICR PPSHSVTPFP GTTSVSFSQA CPQSLARCPQ
60 70 80 90 100
LWSPVLTHSP ASPAMAQNGA VPSEATKKDQ NLTRGNWGNQ IEFVLTSVGY
110 120 130 140 150
AVGLGNVWRF PYLCYRNGGG AFMFPYFIML IFCGIPLFFM ELSFGQFASQ
160 170 180 190 200
GCLGVWRISP MFKGVGYGMM VVSTYIGIYY NVVICIAFYY FFSSMTHVLP
210 220 230 240 250
WAYCNNPWNT PDCAGVLDAS NLTNGSRPAA LSGNLSHLFN YTLQRTSPSE
260 270 280 290 300
EYWRLYVLKL SDDIGNFGEV RLPLLGCLGV SWVVVFLCLI RGVKSSGKVV
310 320 330 340 350
YFTATFPYVV LTILFVRGVT LEGAFTGIMY YLTPQWDKIL EAKVWGDAAS
360 370
QIFYSLGCAW GGLITMASYN KFH
Length:373
Mass (Da):41,094
Last modified:April 5, 2011 - v1
Checksum:i412B7D3F40EC17E6
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei373Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL627128 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000169990; ENSMUSP00000127203; ENSMUSG00000028542

Similar proteinsi

Entry informationi

Entry nameiE9Q3Z2_MOUSE
AccessioniPrimary (citable) accession number: E9Q3Z2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: April 25, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health