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Protein
Submitted name:

Sodium- and chloride-dependent glycine transporter 1

Gene

Slc6a9

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Biological processSymportSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Sodium- and chloride-dependent glycine transporter 1Imported
Gene namesi
Name:Slc6a9Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:95760 Slc6a9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei60 – 86HelicalSequence analysisAdd BLAST27
Transmembranei114 – 139HelicalSequence analysisAdd BLAST26
Transmembranei219 – 240HelicalSequence analysisAdd BLAST22
Transmembranei252 – 279HelicalSequence analysisAdd BLAST28
Transmembranei299 – 316HelicalSequence analysisAdd BLAST18
Transmembranei328 – 353HelicalSequence analysisAdd BLAST26
Transmembranei387 – 408HelicalSequence analysisAdd BLAST22
Transmembranei429 – 455HelicalSequence analysisAdd BLAST27
Transmembranei461 – 481HelicalSequence analysisAdd BLAST21
Transmembranei501 – 524HelicalSequence analysisAdd BLAST24
Transmembranei536 – 561HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

MaxQBiE9Q3V0
PeptideAtlasiE9Q3V0
PRIDEiE9Q3V0

Expressioni

Gene expression databases

BgeeiENSMUSG00000028542
ExpressionAtlasiE9Q3V0 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliE9Q3V0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3659 Eukaryota
COG0733 LUCA
GeneTreeiENSGT00760000118857
OMAiVWKISPM
OrthoDBiEOG091G08PX

Family and domain databases

InterProiView protein in InterPro
IPR000175 Na/ntran_symport
IPR003028 Na/ntran_symport_glycine_GLY1
IPR037272 SNS_sf
PANTHERiPTHR11616 PTHR11616, 1 hit
PfamiView protein in Pfam
PF00209 SNF, 1 hit
PRINTSiPR01204 GLY1TRNSPORT
PR00176 NANEUSMPORT
SUPFAMiSSF161070 SSF161070, 2 hits
PROSITEiView protein in PROSITE
PS00754 NA_NEUROTRAN_SYMP_2, 1 hit
PS50267 NA_NEUROTRAN_SYMP_3, 1 hit

Sequencei

Sequence statusi: Complete.

E9Q3V0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIGGDTRAAS AHPGMASAQG PVATPSPEQN GAVPSEATKK DQNLTRGNWG
60 70 80 90 100
NQIEFVLTSV GYAVGLGAFM FPYFIMLIFC GIPLFFMELS FGQFASQGCL
110 120 130 140 150
GVWRISPMFK GVGYGMMVVS TYIGIYYNVV ICIAFYYFFS SMTHVLPWAY
160 170 180 190 200
CNNPWNTPDC AGVLDASNLT NGSRPAALSG NLSHLFNYTL QRTSPSEEYW
210 220 230 240 250
RLYVLKLSDD IGNFGEVRLP LLGCLGVSWV VVFLCLIRGV KSSGKVVYFT
260 270 280 290 300
ATFPYVVLTI LFVRGVTLEG AFTGIMYYLT PQWDKILEAK VWGDAASQIF
310 320 330 340 350
YSLGCAWGGL ITMASYNKFH NNCYRDSVII SITNCATSVY AGFVIFSILG
360 370 380 390 400
FMANHLGVDV SRVADHGPGL AFVAYPEALT LLPISPLWSL LFFFMLILLG
410 420 430 440 450
LGTQFCLLET LVTAIVDEVG NEWILQKKTY VTLGVAVAGF LLGIPLTSQA
460 470 480 490 500
GIYWLLLMDN YAASFSLVVI SCIMCVSIMY IYGHRNYFQD IQMMLGFPPP
510 520 530 540 550
LFFQICWRFV SPAIIFFILI FTVIQYRPIT YNHYQYPGWA VAIGFLMALS
560 570 580 590 600
SVICIPLYAL FQLCRTDGDT LLQRLKNATK PSRDWGPALL EHRTGRYAPT
610 620 630
TTPSPEDGFE VQPLHPDKAQ IPIVGSNGSS RFQDSRI
Length:637
Mass (Da):70,575
Last modified:April 5, 2011 - v1
Checksum:i3A546991BF622B84
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL627128 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000163288; ENSMUSP00000127289; ENSMUSG00000028542

Similar proteinsi

Entry informationi

Entry nameiE9Q3V0_MOUSE
AccessioniPrimary (citable) accession number: E9Q3V0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 23, 2018
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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