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Protein
Submitted name:

Protein Nup153

Gene

Nup153

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-MMU-159236. Transport of Mature mRNA derived from an Intron-Containing Transcript.
R-MMU-170822. Regulation of Glucokinase by Glucokinase Regulatory Protein.
R-MMU-191859. snRNP Assembly.
R-MMU-3108214. SUMOylation of DNA damage response and repair proteins.
R-MMU-3301854. Nuclear Pore Complex (NPC) Disassembly.
R-MMU-3371453. Regulation of HSF1-mediated heat shock response.
R-MMU-4570464. SUMOylation of RNA binding proteins.
R-MMU-4615885. SUMOylation of DNA replication proteins.
R-MMU-5578749. Transcriptional regulation by small RNAs.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Nup153Imported
Gene namesi
Name:Nup153Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 13

Organism-specific databases

MGIiMGI:2385621. Nup153.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

MaxQBiE9Q3G8.
PaxDbiE9Q3G8.
PeptideAtlasiE9Q3G8.
PRIDEiE9Q3G8.

Expressioni

Gene expression databases

BgeeiENSMUSG00000021374.
GenevisibleiE9Q3G8. MM.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000021803.

Structurei

3D structure databases

ProteinModelPortaliE9Q3G8.
SMRiE9Q3G8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini653 – 683RanBP2-typeInterPro annotationAdd BLAST31
Domaini717 – 746RanBP2-typeInterPro annotationAdd BLAST30
Domaini785 – 814RanBP2-typeInterPro annotationAdd BLAST30
Domaini842 – 871RanBP2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

eggNOGiKOG4719. Eukaryota.
ENOG41107SV. LUCA.
GeneTreeiENSGT00700000104544.
InParanoidiE9Q3G8.
KOiK14296.
OMAiNFKFGDQ.
OrthoDBiEOG091G015X.
TreeFamiTF323517.

Family and domain databases

InterProiIPR013913. Nup153_N.
IPR018892. Retro-transposon_transp_CS.
IPR001876. Znf_RanBP2.
[Graphical view]
PfamiPF08604. Nup153. 1 hit.
PF10599. Nup_retrotrp_bd. 1 hit.
PF00641. zf-RanBP. 4 hits.
[Graphical view]
SMARTiSM00547. ZnF_RBZ. 4 hits.
[Graphical view]
SUPFAMiSSF90209. SSF90209. 3 hits.
PROSITEiPS01358. ZF_RANBP2_1. 4 hits.
PS50199. ZF_RANBP2_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9Q3G8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASEAGGIGG GGGGGKIRTR RCHQGPVKPY QQGRPQHQGI LSRVTESVKN
60 70 80 90 100
IVPGWLQRYF NKSENACSCS PDADEVPPWP ENREDEHAIY ADENTNTDDG
110 120 130 140 150
RITPDPAGSN TEEPSTTSTA SNYPDVLTRP SLHRSHLNFS VLESPALHCQ
160 170 180 190 200
PSTSSAFPIG SSGFSLVKEI KDSTSQHDDD NISTTSGFSS RASEKDIAVS
210 220 230 240 250
KNTSLPPLWS PEAERSHSLS QHTAISSKKP AFNLSAFGTL STSLGNSSIL
260 270 280 290 300
KTSQLGDSPF YPGKTTYGGA AAAVRQNKVR STPYQAPVRR QMKAKQLNAQ
310 320 330 340 350
SYGVTSSTAR RILQSLEKMS SPLADAKRIP SAVSSPLNSP LDRSGIDNTV
360 370 380 390 400
FQAKKEKVDS QYPPVQRLMT PKPVSIATNR TVYFKPSLTP SGDLRKTNQR
410 420 430 440 450
IDKKNSTVDE KSISRQNREQ ESGFSYPNFS IPAANGLSSG VGGGGGKMRR
460 470 480 490 500
ERTHFVAPKP PENEEVEAPL LPQISLPISS SSLPTFSFSS PVTSASPSPV
510 520 530 540 550
SSSQPLPNKV QMTSLGSTGS PVFTFSSPIV KSTQAAVLPP ASIGFTFSVP
560 570 580 590 600
LAKTEFSGSN SSSETVLSSS AQDITAVNSS SYKKRSAPCE DPFTPAKILR
610 620 630 640 650
EGSVLDILKT PGFASPKVDS PALQPTTTSS IVYTRPAIST FSSSGIEYGE
660 670 680 690 700
SLKAGSSWQC DTCLLQNKVT DNKCIACQAA KLPLKETAKQ TGTGTPSKSD
710 720 730 740 750
KPASTSGTGF GDKFKPAIGT WDCDTCLVQN KPEAVKCVAC ETPKPGTGVK
760 770 780 790 800
RALTLTVASE SPVTASSSTT VTTGTLGFGD KFKRPVGSWE CPVCCVCNKA
810 820 830 840 850
EDNRCVSCTS EKPGLVSASS SSPAPVSLSS GGCLGLDKFK KPEGSWDCEV
860 870 880 890 900
CLVQNKADSA KCIACESAKP GTKSEFKGFG TSSSLNPAPS AFKFGIPSSS
910 920 930 940 950
SGLSQTLTST GNFKFGDQGG FKLGTSSDSG STNTMNTNFK FSKPTGDFKF
960 970 980 990 1000
GVLSDSKPEE VKNDNKNDNF QFGSSSGLTN PASSAPFQFG VSTLGQQEKK
1010 1020 1030 1040 1050
EELPKSSPAG FSFGAGVNNP PNAAIDTTAT SENKSGFNFG TLDTKSVSVT
1060 1070 1080 1090 1100
PFTYKTTEAK KEDAPATKGG FTFGKVGSSS LPSSSMFVLG RTEEKQQEPV
1110 1120 1130 1140 1150
TSTSLVFGKK ADSEEPKCQP VFSFGNSEQT KDESSKPTFS FSVAKPSGKE
1160 1170 1180 1190 1200
SEQLAKATFA FGNQTNTTTD QGAAKPVFSF LNSSSSSSSA PATSSSGGIF
1210 1220 1230 1240 1250
GSSTSSSNPP VAAFVFGQAS NPVSSSAFGN AAESSTSQSL LFPQESEPAT
1260 1270 1280 1290 1300
TSSTAPAASP FVFGTGASSN SVSSGFTFGA TTTSSSSGSS FVFGTGHSAP
1310 1320 1330 1340 1350
SASPAFGANQ TPTFGQSQGA SQPNPPSFGS ISSSTALFSA GSQPVPPPIF
1360 1370 1380 1390 1400
GTVSSSSQPP VFGQQPSQSA FGSGTANASS VFQFGSSTTN FNFTNNNPSG
1410 1420 1430 1440 1450
VFTFGASPST PAASAQPSGS GVFSFSQSPA SFTVGSNGKN MFSSSGTSVS
1460
GRKIKTAVRR KK
Length:1,462
Mass (Da):152,008
Last modified:April 5, 2011 - v1
Checksum:i1A6FC0CD8AA2C3FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC124598 Genomic DNA. No translation available.
RefSeqiNP_786925.2. NM_175749.2.
UniGeneiMm.255398.
Mm.445069.

Genome annotation databases

EnsembliENSMUST00000021803; ENSMUSP00000021803; ENSMUSG00000021374.
GeneIDi218210.
KEGGimmu:218210.
UCSCiuc007qhj.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC124598 Genomic DNA. No translation available.
RefSeqiNP_786925.2. NM_175749.2.
UniGeneiMm.255398.
Mm.445069.

3D structure databases

ProteinModelPortaliE9Q3G8.
SMRiE9Q3G8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000021803.

Proteomic databases

MaxQBiE9Q3G8.
PaxDbiE9Q3G8.
PeptideAtlasiE9Q3G8.
PRIDEiE9Q3G8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000021803; ENSMUSP00000021803; ENSMUSG00000021374.
GeneIDi218210.
KEGGimmu:218210.
UCSCiuc007qhj.2. mouse.

Organism-specific databases

CTDi9972.
MGIiMGI:2385621. Nup153.

Phylogenomic databases

eggNOGiKOG4719. Eukaryota.
ENOG41107SV. LUCA.
GeneTreeiENSGT00700000104544.
InParanoidiE9Q3G8.
KOiK14296.
OMAiNFKFGDQ.
OrthoDBiEOG091G015X.
TreeFamiTF323517.

Enzyme and pathway databases

ReactomeiR-MMU-159236. Transport of Mature mRNA derived from an Intron-Containing Transcript.
R-MMU-170822. Regulation of Glucokinase by Glucokinase Regulatory Protein.
R-MMU-191859. snRNP Assembly.
R-MMU-3108214. SUMOylation of DNA damage response and repair proteins.
R-MMU-3301854. Nuclear Pore Complex (NPC) Disassembly.
R-MMU-3371453. Regulation of HSF1-mediated heat shock response.
R-MMU-4570464. SUMOylation of RNA binding proteins.
R-MMU-4615885. SUMOylation of DNA replication proteins.
R-MMU-5578749. Transcriptional regulation by small RNAs.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000021374.
GenevisibleiE9Q3G8. MM.

Family and domain databases

InterProiIPR013913. Nup153_N.
IPR018892. Retro-transposon_transp_CS.
IPR001876. Znf_RanBP2.
[Graphical view]
PfamiPF08604. Nup153. 1 hit.
PF10599. Nup_retrotrp_bd. 1 hit.
PF00641. zf-RanBP. 4 hits.
[Graphical view]
SMARTiSM00547. ZnF_RBZ. 4 hits.
[Graphical view]
SUPFAMiSSF90209. SSF90209. 3 hits.
PROSITEiPS01358. ZF_RANBP2_1. 4 hits.
PS50199. ZF_RANBP2_2. 4 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiE9Q3G8_MOUSE
AccessioniPrimary (citable) accession number: E9Q3G8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: November 30, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.