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Protein
Submitted name:

Histone deacetylase complex subunit SAP18

Gene

Sap18b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Histone deacetylase complex subunit SAP18Imported
Submitted name:
Protein Sap18bImported
Gene namesi
Name:Sap18bImported
Synonyms:Sap18Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componentsi: Chromosome 14, Chromosome 8

Organism-specific databases

MGIiMGI:1277978. Sap18.
MGI:3704317. Sap18b.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000021963.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000120071.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3391. Eukaryota.
ENOG4111FBB. LUCA.
GeneTreeiENSGT00390000003152.
KOiK14324.
OMAiRNNHFQM.
OrthoDBiEOG091G0SRZ.
TreeFamiTF313032.

Family and domain databases

InterProiIPR017250. Hist_deAcase_cplx_SAP18.
IPR010516. SAP18.
[Graphical view]
PANTHERiPTHR13082. PTHR13082. 1 hit.
PfamiPF06487. SAP18. 1 hit.
[Graphical view]
PIRSFiPIRSF037637. HDAC_SAP18. 1 hit.

Sequencei

Sequence statusi: Complete.

E9Q317-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAAGVGGQG ERLPGRRRKM AVESRVTQEE IKKEPEKPID REKTCPLLLR
60 70 80 90 100
VFTTNNGRHH RMDEFSRGNV PSSELQIYTW MDATLKELTS LVKEVYPEAR
110 120 130 140 150
KKGTHFNFAI VFMDLKRPGY RVKEIGSTMS GRKGTDDSMT LQSQKFQIGD
160 170
YLDIAITPPN RAPPSSGRMR PY
Length:172
Mass (Da):19,586
Last modified:April 5, 2011 - v1
Checksum:i4F6CA584D8C2EF30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC119813 Genomic DNA. No translation available.
AC127300 Genomic DNA. No translation available.
RefSeqiNP_001135913.1. NM_001142441.1.
NP_033145.2. NM_009119.3.
UniGeneiMm.290178.
Mm.30173.
Mm.344671.

Genome annotation databases

EnsembliENSMUST00000074053; ENSMUSP00000073697; ENSMUSG00000061104.
ENSMUST00000128764; ENSMUSP00000120071; ENSMUSG00000021963.
GeneIDi100041953.
20220.
KEGGimmu:100041953.
mmu:20220.
UCSCiuc007udo.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC119813 Genomic DNA. No translation available.
AC127300 Genomic DNA. No translation available.
RefSeqiNP_001135913.1. NM_001142441.1.
NP_033145.2. NM_009119.3.
UniGeneiMm.290178.
Mm.30173.
Mm.344671.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000120071.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000074053; ENSMUSP00000073697; ENSMUSG00000061104.
ENSMUST00000128764; ENSMUSP00000120071; ENSMUSG00000021963.
GeneIDi100041953.
20220.
KEGGimmu:100041953.
mmu:20220.
UCSCiuc007udo.2. mouse.

Organism-specific databases

CTDi100041953.
10284.
MGIiMGI:1277978. Sap18.
MGI:3704317. Sap18b.

Phylogenomic databases

eggNOGiKOG3391. Eukaryota.
ENOG4111FBB. LUCA.
GeneTreeiENSGT00390000003152.
KOiK14324.
OMAiRNNHFQM.
OrthoDBiEOG091G0SRZ.
TreeFamiTF313032.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000021963.

Family and domain databases

InterProiIPR017250. Hist_deAcase_cplx_SAP18.
IPR010516. SAP18.
[Graphical view]
PANTHERiPTHR13082. PTHR13082. 1 hit.
PfamiPF06487. SAP18. 1 hit.
[Graphical view]
PIRSFiPIRSF037637. HDAC_SAP18. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE9Q317_MOUSE
AccessioniPrimary (citable) accession number: E9Q317
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: September 7, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.