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E9Q0Z0

- E9Q0Z0_MOUSE

UniProt

E9Q0Z0 - E9Q0Z0_MOUSE

Protein
Submitted name:

Semaphorin-3C

Gene

Sema3c

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. semaphorin receptor binding Source: MGI

    GO - Biological processi

    1. blood vessel remodeling Source: MGI
    2. dichotomous subdivision of terminal units involved in salivary gland branching Source: MGI
    3. heart development Source: MGI
    4. neural crest cell migration Source: MGI
    5. post-embryonic development Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Semaphorin-3CImported
    Gene namesi
    Name:Sema3cImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 5

    Organism-specific databases

    MGIiMGI:107557. Sema3c.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular space Source: MGI

    Expressioni

    Gene expression databases

    ArrayExpressiE9Q0Z0.
    BgeeiE9Q0Z0.

    Structurei

    3D structure databases

    ProteinModelPortaliE9Q0Z0.
    SMRiE9Q0Z0. Positions 23-226.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains Sema domain.SAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00690000102148.

    Family and domain databases

    Gene3Di2.130.10.10. 1 hit.
    InterProiIPR001627. Semap_dom.
    IPR027231. Semaphorin.
    IPR015943. WD40/YVTN_repeat-like_dom.
    [Graphical view]
    PANTHERiPTHR11036. PTHR11036. 1 hit.
    PfamiPF01403. Sema. 1 hit.
    [Graphical view]
    SUPFAMiSSF101912. SSF101912. 1 hit.
    PROSITEiPS51004. SEMA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    E9Q0Z0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAFRAICVLV GVFICSICVR GSSQPQARVY LTFDELRETK TSEYFSLSHQ    50
    QLDYRILLMD EDQDRIYVGS KDHILSLNIN NISQEPLSVF WPASTIKVEE 100
    CKMAGKDPTH GCGNFVRVIQ TFNRTHLYVC GSGAFSPVCT YLNRGRRSEV 150
    FMIDSKCESG KGRCSFNPNV NTVSVMINEE LFSGMYIDFM GTDAAIFRSL 200
    TKRNAVRTDQ HNSKWLSEPM FVDAHV 226
    Length:226
    Mass (Da):25,641
    Last modified:April 5, 2011 - v1
    Checksum:iBEC1C7C05FC032E0
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei226 – 2261Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC122936 Genomic DNA. No translation available.
    AC161507 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSMUST00000169603; ENSMUSP00000132330; ENSMUSG00000028780.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC122936 Genomic DNA. No translation available.
    AC161507 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali E9Q0Z0.
    SMRi E9Q0Z0. Positions 23-226.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000169603 ; ENSMUSP00000132330 ; ENSMUSG00000028780 .

    Organism-specific databases

    MGIi MGI:107557. Sema3c.

    Phylogenomic databases

    GeneTreei ENSGT00690000102148.

    Miscellaneous databases

    NextBioi 35554654.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi E9Q0Z0.
    Bgeei E9Q0Z0.

    Family and domain databases

    Gene3Di 2.130.10.10. 1 hit.
    InterProi IPR001627. Semap_dom.
    IPR027231. Semaphorin.
    IPR015943. WD40/YVTN_repeat-like_dom.
    [Graphical view ]
    PANTHERi PTHR11036. PTHR11036. 1 hit.
    Pfami PF01403. Sema. 1 hit.
    [Graphical view ]
    SUPFAMi SSF101912. SSF101912. 1 hit.
    PROSITEi PS51004. SEMA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    2. Ensembl
      Submitted (MAY-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiE9Q0Z0_MOUSE
    AccessioniPrimary (citable) accession number: E9Q0Z0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3