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E9Q0Z0

- E9Q0Z0_MOUSE

UniProt

E9Q0Z0 - E9Q0Z0_MOUSE

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Protein
Submitted name:

Semaphorin-3C

Gene

Sema3c

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. semaphorin receptor binding Source: MGI

GO - Biological processi

  1. blood vessel remodeling Source: MGI
  2. dichotomous subdivision of terminal units involved in salivary gland branching Source: MGI
  3. heart development Source: MGI
  4. neural crest cell migration Source: MGI
  5. post-embryonic development Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Semaphorin-3CImported
Gene namesi
Name:Sema3cImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 5

Organism-specific databases

MGIiMGI:107557. Sema3c.

Subcellular locationi

GO - Cellular componenti

  1. extracellular space Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiE9Q0Z0.
ExpressionAtlasiE9Q0Z0. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliE9Q0Z0.
SMRiE9Q0Z0. Positions 23-226.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains Sema domain.SAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118854.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PANTHERiPTHR11036. PTHR11036. 1 hit.
PfamiPF01403. Sema. 1 hit.
[Graphical view]
SUPFAMiSSF101912. SSF101912. 1 hit.
PROSITEiPS51004. SEMA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

E9Q0Z0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAFRAICVLV GVFICSICVR GSSQPQARVY LTFDELRETK TSEYFSLSHQ
60 70 80 90 100
QLDYRILLMD EDQDRIYVGS KDHILSLNIN NISQEPLSVF WPASTIKVEE
110 120 130 140 150
CKMAGKDPTH GCGNFVRVIQ TFNRTHLYVC GSGAFSPVCT YLNRGRRSEV
160 170 180 190 200
FMIDSKCESG KGRCSFNPNV NTVSVMINEE LFSGMYIDFM GTDAAIFRSL
210 220
TKRNAVRTDQ HNSKWLSEPM FVDAHV
Length:226
Mass (Da):25,641
Last modified:April 5, 2011 - v1
Checksum:iBEC1C7C05FC032E0
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei226 – 2261Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122936 Genomic DNA. No translation available.
AC161507 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000169603; ENSMUSP00000132330; ENSMUSG00000028780.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122936 Genomic DNA. No translation available.
AC161507 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali E9Q0Z0.
SMRi E9Q0Z0. Positions 23-226.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000169603 ; ENSMUSP00000132330 ; ENSMUSG00000028780 .

Organism-specific databases

MGIi MGI:107557. Sema3c.

Phylogenomic databases

GeneTreei ENSGT00760000118854.

Miscellaneous databases

NextBioi 35554654.
SOURCEi Search...

Gene expression databases

Bgeei E9Q0Z0.
ExpressionAtlasi E9Q0Z0. baseline and differential.

Family and domain databases

Gene3Di 2.130.10.10. 1 hit.
InterProi IPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view ]
PANTHERi PTHR11036. PTHR11036. 1 hit.
Pfami PF01403. Sema. 1 hit.
[Graphical view ]
SUPFAMi SSF101912. SSF101912. 1 hit.
PROSITEi PS51004. SEMA. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9Q0Z0_MOUSE
AccessioniPrimary (citable) accession number: E9Q0Z0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 29, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3