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E9Q0Z0

- E9Q0Z0_MOUSE

UniProt

E9Q0Z0 - E9Q0Z0_MOUSE

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Protein
Submitted name: Semaphorin-3C
Gene
Sema3c
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. semaphorin receptor binding Source: MGI

GO - Biological processi

  1. blood vessel remodeling Source: MGI
  2. dichotomous subdivision of terminal units involved in salivary gland branching Source: MGI
  3. heart development Source: MGI
  4. neural crest cell migration Source: MGI
  5. post-embryonic development Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Semaphorin-3CImported
Gene namesi
Name:Sema3cImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 5

Organism-specific databases

MGIiMGI:107557. Sema3c.

Subcellular locationi

GO - Cellular componenti

  1. extracellular space Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

ArrayExpressiE9Q0Z0.
BgeeiE9Q0Z0.

Structurei

3D structure databases

ProteinModelPortaliE9Q0Z0.
SMRiE9Q0Z0. Positions 23-226.

Family & Domainsi

Sequence similaritiesi

Contains Sema domain.SAAS annotations

Phylogenomic databases

GeneTreeiENSGT00690000102148.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PANTHERiPTHR11036. PTHR11036. 1 hit.
PfamiPF01403. Sema. 1 hit.
[Graphical view]
SUPFAMiSSF101912. SSF101912. 1 hit.
PROSITEiPS51004. SEMA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

E9Q0Z0-1 [UniParc]FASTAAdd to Basket

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MAFRAICVLV GVFICSICVR GSSQPQARVY LTFDELRETK TSEYFSLSHQ    50
QLDYRILLMD EDQDRIYVGS KDHILSLNIN NISQEPLSVF WPASTIKVEE 100
CKMAGKDPTH GCGNFVRVIQ TFNRTHLYVC GSGAFSPVCT YLNRGRRSEV 150
FMIDSKCESG KGRCSFNPNV NTVSVMINEE LFSGMYIDFM GTDAAIFRSL 200
TKRNAVRTDQ HNSKWLSEPM FVDAHV 226
Length:226
Mass (Da):25,641
Last modified:April 5, 2011 - v1
Checksum:iBEC1C7C05FC032E0
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei226 – 2261Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC122936 Genomic DNA. No translation available.
AC161507 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000169603; ENSMUSP00000132330; ENSMUSG00000028780.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC122936 Genomic DNA. No translation available.
AC161507 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali E9Q0Z0.
SMRi E9Q0Z0. Positions 23-226.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000169603 ; ENSMUSP00000132330 ; ENSMUSG00000028780 .

Organism-specific databases

MGIi MGI:107557. Sema3c.

Phylogenomic databases

GeneTreei ENSGT00690000102148.

Miscellaneous databases

NextBioi 35554654.
SOURCEi Search...

Gene expression databases

ArrayExpressi E9Q0Z0.
Bgeei E9Q0Z0.

Family and domain databases

Gene3Di 2.130.10.10. 1 hit.
InterProi IPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view ]
PANTHERi PTHR11036. PTHR11036. 1 hit.
Pfami PF01403. Sema. 1 hit.
[Graphical view ]
SUPFAMi SSF101912. SSF101912. 1 hit.
PROSITEi PS51004. SEMA. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9Q0Z0_MOUSE
AccessioniPrimary (citable) accession number: E9Q0Z0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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