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Protein
Submitted name:

Basement membrane-specific heparan sulfate proteoglycan core protein

Gene

Hspg2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

ReactomeiR-MMU-1474228. Degradation of the extracellular matrix.
R-MMU-174800. Chylomicron-mediated lipid transport.
R-MMU-1971475. A tetrasaccharide linker sequence is required for GAG synthesis.
R-MMU-2022928. HS-GAG biosynthesis.
R-MMU-2024096. HS-GAG degradation.
R-MMU-216083. Integrin cell surface interactions.
R-MMU-3000157. Laminin interactions.
R-MMU-3000171. Non-integrin membrane-ECM interactions.
R-MMU-975634. Retinoid metabolism and transport.

Names & Taxonomyi

Protein namesi
Submitted name:
Basement membrane-specific heparan sulfate proteoglycan core proteinImported
Gene namesi
Name:Hspg2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:96257. Hspg2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Sequence analysisAdd
BLAST
Chaini26 – 43834358Sequence analysisPRO_5003243035Add
BLAST

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

MaxQBiE9PZ16.
PaxDbiE9PZ16.
PRIDEiE9PZ16.

Expressioni

Gene expression databases

BgeeiE9PZ16.
ExpressionAtlasiE9PZ16. baseline and differential.
GenevisibleiE9PZ16. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000131316.

Structurei

3D structure databases

ProteinModelPortaliE9PZ16.
SMRiE9PZ16. Positions 1769-1857, 4190-4383.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini80 – 191112SEAInterPro annotationAdd
BLAST
Domaini406 – 48479Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini545 – 730186Laminin IV type AInterPro annotationAdd
BLAST
Domaini764 – 81350Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini814 – 87158Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini878 – 92346Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini948 – 1125178Laminin IV type AInterPro annotationAdd
BLAST
Domaini1159 – 120850Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini1209 – 126557Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini1275 – 132450Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini1351 – 1529179Laminin IV type AInterPro annotationAdd
BLAST
Domaini1563 – 161250Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini1613 – 167058Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini1670 – 176394Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini1769 – 185991Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini1865 – 194884Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini1955 – 203884Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2051 – 213282Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2145 – 223187Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2245 – 232278Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2336 – 242388Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2435 – 251783Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2524 – 261491Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2624 – 271087Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2724 – 280784Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2824 – 290683Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini2912 – 300594Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini3019 – 310486Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini3109 – 319789Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini3208 – 328881Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini3295 – 337985Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini3396 – 348085Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini3483 – 356785Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini3572 – 365382Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini3659 – 3841183LAM_G_DOMAINInterPro annotationAdd
BLAST
Domaini3839 – 387436EGF-likeInterPro annotationAdd
BLAST
Domaini3877 – 391539EGF-likeInterPro annotationAdd
BLAST
Domaini3921 – 4101181LAM_G_DOMAINInterPro annotationAdd
BLAST
Domaini4097 – 413438EGF-likeInterPro annotationAdd
BLAST
Domaini4136 – 416934EGF-likeInterPro annotationAdd
BLAST
Domaini4194 – 4381188LAM_G_DOMAINInterPro annotationAdd
BLAST

Keywords - Domaini

Laminin EGF-like domainSAAS annotation, RepeatSAAS annotation, SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3509. Eukaryota.
ENOG410XTD2. LUCA.
GeneTreeiENSGT00530000063501.
KOiK06255.
OMAiTCRNLHH.
TreeFamiTF326548.

Family and domain databases

Gene3Di2.60.120.200. 3 hits.
2.60.40.10. 22 hits.
4.10.400.10. 4 hits.
InterProiIPR013320. ConA-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003599. Ig_sub.
IPR003598. Ig_sub2.
IPR013106. Ig_V-set.
IPR002049. Laminin_EGF.
IPR001791. Laminin_G.
IPR000034. Laminin_IV.
IPR023415. LDLR_class-A_CS.
IPR002172. LDrepeatLR_classA_rpt.
IPR000082. SEA_dom.
[Graphical view]
PfamiPF00008. EGF. 2 hits.
PF07679. I-set. 12 hits.
PF00052. Laminin_B. 3 hits.
PF00053. Laminin_EGF. 9 hits.
PF00054. Laminin_G_1. 3 hits.
PF00057. Ldl_recept_a. 4 hits.
[Graphical view]
PRINTSiPR00261. LDLRECEPTOR.
SMARTiSM00181. EGF. 10 hits.
SM00179. EGF_CA. 5 hits.
SM00180. EGF_Lam. 9 hits.
SM00409. IG. 22 hits.
SM00408. IGc2. 22 hits.
SM00406. IGv. 8 hits.
SM00281. LamB. 3 hits.
SM00282. LamG. 3 hits.
SM00192. LDLa. 4 hits.
SM00200. SEA. 1 hit.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 22 hits.
SSF49899. SSF49899. 4 hits.
SSF57424. SSF57424. 4 hits.
PROSITEiPS00022. EGF_1. 9 hits.
PS01186. EGF_2. 6 hits.
PS50026. EGF_3. 4 hits.
PS01248. EGF_LAM_1. 11 hits.
PS50027. EGF_LAM_2. 8 hits.
PS50835. IG_LIKE. 22 hits.
PS50025. LAM_G_DOMAIN. 3 hits.
PS51115. LAMININ_IVA. 3 hits.
PS01209. LDLRA_1. 4 hits.
PS50068. LDLRA_2. 4 hits.
PS50024. SEA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9PZ16-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQRAVGSLL LGLLLHARLL AVTHGLRAYD GLSLPEDTET VTASRYGWTY
60 70 80 90 100
SYLSDDEDLL ADDASGDGLG SGDVGSGDFQ MVYFRALVNF TRSIEYSPQL
110 120 130 140 150
EDASAKEFRE VSEAVVEKLE PEYRKIPGDQ IVSVVFIKEL DGWVFVELDV
160 170 180 190 200
GSEGNADGSQ IQEVLHTVVS SGSIGPYVTS PWGFKFRRLG TVPQFPRVCT
210 220 230 240 250
ETEFACHSYN ECVALEYRCD RRPDCRDMSD ELNCEEPVPE LSSSTPAVGK
260 270 280 290 300
VSPLPLWPEA ATTPPPPVTH GPQFLLPSVP GPSACGPQEA SCHSGHCIPR
310 320 330 340 350
DYLCDGQEDC RDGSDELGCA SPPPCEPNEF ACENGHCALK LWRCDGDFDC
360 370 380 390 400
EDRTDEANCS VKQPGEVCGP THFQCVSTNR CIPASFHCDE ESDCPDRSDE
410 420 430 440 450
FGCMPPQVVT PPQQSIQASR GQTVTFTCVA TGVPTPIINW RLNWGHIPAH
460 470 480 490 500
PRVTMTSEGG RGTLIIRDVK EADQGAYTCE AMNSRGMVFG IPDGVLELVP
510 520 530 540 550
QRGPCPDGHF YLEDSASCLP CFCFGVTNVC QSSLRFRDQI RLSFDQPNDF
560 570 580 590 600
KGVNVTMPSQ PGVPPLSSTQ LQIDPALQEF QLVDLSRRFL VHDAFWALPK
610 620 630 640 650
QFLGNKVDSY GGFLRYKVRY ELARGMLEPV QKPDVILVGA GYRLHSRGHT
660 670 680 690 700
PTHPGTLNQR QVQLSEEHWV HESGRPVQRA EMLQALASLE AVLLQTVYNT
710 720 730 740 750
KMASVGLSDI VMDTTVTHTT IHGRAHSVEE CRCPIGYSGL SCESCDAHFT
760 770 780 790 800
RVPGGPYLGT CSGCNCNGHA SSCDPVYGHC LNCQHNTEGP QCDKCKPGFF
810 820 830 840 850
GDATKATATA CRPCPCPYID ASRRFSDTCF LDTDGQATCD ACAPGYTGRR
860 870 880 890 900
CESCAPGYEG NPIQPGGKCR PTTQEIVRCD ERGSLGTSGE TCRCKNNVVG
910 920 930 940 950
RLCNECSDGS FHLSKQNPDG CLKCFCMGVS RQCSSSSWSR AQVLGASEQP
960 970 980 990 1000
SQFSLSNAAG THTTSEGVSS PAPGELSFSS FHNLLSEPYF WSLPASFRGD
1010 1020 1030 1040 1050
KVTSYGGELR FTVTQRPRPS SAPLHRQPLV VLQGNNIVLE HHASRDPSPG
1060 1070 1080 1090 1100
QPSNFIVPFQ EQAWQRPDGQ PATREHLLMA LAGIDALLIQ ASYTQQPAES
1110 1120 1130 1140 1150
RVSGISMDVA VPENTGQDSA REVEQCTCPP GYRGPSCQDC DTGYTRVPSG
1160 1170 1180 1190 1200
LYLGTCERCN CHGHSETCEP ETGACQSCQH HTEGASCEQC QPGYYGDAQR
1210 1220 1230 1240 1250
GTPQDCQPCP CYGAPAAGQA AHTCFLDTDG HPTCDSCSPG HSGRHCERCA
1260 1270 1280 1290 1300
PGYYGNPSQG QPCHRDGQVP EVLGCGCDPH GSISSQCDAA GQCQCKAQVE
1310 1320 1330 1340 1350
GRTCSHCRPH HFHLSASNPE GCLPCFCMGV TQQCASSSYS RQLISTHFAP
1360 1370 1380 1390 1400
GDFQGFALVN PQRNSQLTGG FTVEPVHDGA RLSFSNFAHL GQESFYWQLP
1410 1420 1430 1440 1450
EIYQGDKVAA YGGKLRYTLS YTAGPQGSPL LDPDIQITGN NIMLVASQPA
1460 1470 1480 1490 1500
LQGPERRSYE IIFREEFWRR PDGQPATREH LLMALADLDE LLVRATFSSV
1510 1520 1530 1540 1550
PRAASISAVS LEVAQPGPSS GPRALEVEEC RCPPGYVGLS CQDCAPGYTR
1560 1570 1580 1590 1600
TGSGLYLGQC ELCECNGHSD LCHPETGACS RCQHNTAGEF CELCATGYYG
1610 1620 1630 1640 1650
DATAGTPEDC QPCACPLTNP ENMFSRTCES LGAGGYRCTA CEPGYTGQYC
1660 1670 1680 1690 1700
EQCAPGYEGD PNVQGGRCQP LTKESLEVQI HPSRSVVPQG GPHSLRCQVS
1710 1720 1730 1740 1750
GSPPHYFYWS REDGRPLPSS AQQRHQGSEL HFPSVQPSDA GVYICTCRNL
1760 1770 1780 1790 1800
IHTSNSRAEL LVAEAPSKPI TVTVEEQRSQ SVRPGADVTF ICTAKSKSPA
1810 1820 1830 1840 1850
YTLVWTRLHN GKLPSRAMDF NGILTIRNVQ PSDAGTYVCT GSNMFAMDQG
1860 1870 1880 1890 1900
TATLHVQVSG TSTAPVASIH PPQLTVQPGQ QAEFRCSATG NPTPMLEWIG
1910 1920 1930 1940 1950
GPSGQLPAKA QIHNGILRLP AIEPSDQGQY LCRALSSAGQ HVARAMLQVH
1960 1970 1980 1990 2000
GGSGPRVQVS PERTQVHEGR TVRLYCRAAG VPSASITWRK EGGSLPPQAR
2010 2020 2030 2040 2050
SENTDIPTLL IPAITAADAG FYLCVATSPT GTAQARIQVV VLSASGANSV
2060 2070 2080 2090 2100
PVRIESSSPS VTEGQTLDLN CAVMGLTYTQ VTWYKRGGSL PPHAQVHGSR
2110 2120 2130 2140 2150
LRLPQVSPAD SGDYVCRVES DVGPKEASIV VSVLHSPHSG PSYTPATSIT
2160 2170 2180 2190 2200
PPIRIESSSS HVAEGQTLDL NCVVPGQAQV TWRKRGGSLP ARHQTHGSLL
2210 2220 2230 2240 2250
RLHQVSPADS GEYVCHVVLG SEHTETSVLV TIEPAESIPA PGPAPPVRIE
2260 2270 2280 2290 2300
ASSSTVTEGH MLDLNCVVAG QAHAQVTWYK RGGSLPARHQ VRGSRLYILQ
2310 2320 2330 2340 2350
ASPADAGEYV CRAGNGQEAT ITVTVTRNHG ANLAYPPGST SPIRIESSSS
2360 2370 2380 2390 2400
HVAEGQTLDL NCVVQGQAHA QVTWHKRGGS LPARHQTHGS LLRLHQVSPV
2410 2420 2430 2440 2450
DSGEYVCRVE GGAVPLESSV LVTIEPAGTA PGVIPPVRIE SSSSHVSEGQ
2460 2470 2480 2490 2500
SLDLNCLVSG QTHPQISWHK RGGSLPARHQ VHGSRLRLLQ VTPTDSGEYV
2510 2520 2530 2540 2550
CRVVSGSGTQ EASILVTIQQ TLSPSHSQSV VHPVRIESSS PSLANGHTLD
2560 2570 2580 2590 2600
LNCLVASLTP HTITWYKRGG SLPSRHQIVG SRLRIPQVTP ADSGEYVCHV
2610 2620 2630 2640 2650
SNGAGSQETS LIVTIESRGP SHVPSVSPPM RIETSSPTVT EGQTLDLNCV
2660 2670 2680 2690 2700
VVGRPQATIT WYKRGGSLPF RHQAHGSRLR LHHMSVADSG EYVCRANNNI
2710 2720 2730 2740 2750
DAQETSIMIS VSPSTNSPPA PASPAPIRIE SSSSRVAEGQ TLDLNCVVPG
2760 2770 2780 2790 2800
HAHAQVTWHK RGGSLPTHHQ THGSRLRLYQ VSSADSGEYV CSVLSSSGPL
2810 2820 2830 2840 2850
EASVLVSITP AAANVHIPGE VPFPPIRIET SSSRVAEGQT LDLSCVVPGQ
2860 2870 2880 2890 2900
AHAQVTWHKR GGSLPAGHQV HGHMLRLNRV SPADSGEYSC QVTGSSGTLE
2910 2920 2930 2940 2950
ASVLVTIEAS EPSPIPAPGL AQPVYIESSS SHLTEGQTVD LKCVVPGQAH
2960 2970 2980 2990 3000
AQVTWHKRGS SLPARHQTHG SLLRLYQLSP ADSGEYVCQV AGSSHPEHEA
3010 3020 3030 3040 3050
SFKLTVPSSQ NSSFRLRSPV ISIEPPSSTV QQGQDASFKC LIHEGATPIK
3060 3070 3080 3090 3100
VEWKIRDQEL EDNVHISPNG SIITIVGTRP SNHGAYRCVA SNVYGMAQSV
3110 3120 3130 3140 3150
VNLSVHGPPT VSVLPEGPVH VKMGKDITLE CISSGEPRSS PRWTRLGIPV
3160 3170 3180 3190 3200
KLEPRMFGLM NSHAMLKIAS VKPSDAGTYV CQAQNALGTA QKQVELIVDT
3210 3220 3230 3240 3250
GTVAPGAPQV QVEESELTLE AGHTATLHCS ATGNPPPTIH WSKLRAPLPW
3260 3270 3280 3290 3300
QHRIEGNTLV IPRVAQQDSG QYICNATNSA GHTEATVVLH VESPPYATII
3310 3320 3330 3340 3350
PEHTSAQPGN LVQLQCLAHG TPPLTYQWSL VGGVLPEKAV ARNQVLRLEP
3360 3370 3380 3390 3400
TVPEDSGRYR CQVSNRVGSA EAFAQVLVQG SSSNLPDTSI PGGSTPTVQV
3410 3420 3430 3440 3450
TPQLETRNIG ASVEFHCAVP NERGTHLRWL KEGGQLPPGH SVQDGVLRIQ
3460 3470 3480 3490 3500
NLDQSCQGTY VCQAHGPWGQ AQATAQLIVQ ALPSVLINVR TSVHSVVVGH
3510 3520 3530 3540 3550
SVEFECLALG DPKPQVTWSK VGGHLRPGIV QSGSIIRIAH VELADAGQYR
3560 3570 3580 3590 3600
CAATNAAGTT QSHVLLLVQA LPQISTPPEI RVPAGSAAVF PCMASGYPTP
3610 3620 3630 3640 3650
AITWSKVDGD LPPDSRLENN MLMLPSVRPE DAGTYVCTAT NRQGKVKAFA
3660 3670 3680 3690 3700
YLQVPERVIP YFTQTPYSFL PLPTIKDAYR KFEIKITFRP DSADGMLLYN
3710 3720 3730 3740 3750
GQKRSPTNLA NRQPDFISFG LVGGRPEFRF DAGSGMATIR HPTPLALGQF
3760 3770 3780 3790 3800
HTVTLLRSLT QGSLIVGNLA PVNGTSQGKF QGLDLNEELY LGGYPDYGAI
3810 3820 3830 3840 3850
PKAGLSSGFV GCVRELRIQG EEVVFHDVNL TTHGISHCPT CQDRPCQNGG
3860 3870 3880 3890 3900
QCQDSESSSY TCVCPAGFTG SRCEHSQALH CHPEACGPDA TCVNRPDGRG
3910 3920 3930 3940 3950
YTCRCHLGRS GVRCEEGVTV TTPSMSGAGS YLALPALTNM HHELRLDVEF
3960 3970 3980 3990 4000
KPLEPNGILL FSGGKSGPVE DFVSLAMVGG HLEFRYELGS GLAVLRSHEP
4010 4020 4030 4040 4050
LTLGRWHRVS AERLNKDGSL RVDGGRPVLR SSPGKSQGLN LHTLLYLGGV
4060 4070 4080 4090 4100
EPSVQLSPAT NMSAHFHGCV GEVSVNGKRL DLTYSFLGSQ GVGQCYDSSP
4110 4120 4130 4140 4150
CERQPCQNGA TCMPAGEYEF QCLCQDGFKG DLCEHEENPC QLHEPCLNGG
4160 4170 4180 4190 4200
TCRGARCLCL PGFSGPRCQQ GAGYGVVESD WHPEGSGGND APGQYGAYFY
4210 4220 4230 4240 4250
DNGFLGLPGN SFSRSLPEVP ETIEFEVRTS TADGLLLWQG VVREASRSKD
4260 4270 4280 4290 4300
FISLGLQDGH LVFSYQLGSG EARLVSEDPI NDGEWHRITA LREGQRGSIQ
4310 4320 4330 4340 4350
VDGEDLVTGR SPGPNVAVNT KDIIYIGGAP DVATLTRGKF SSGITGCIKN
4360 4370 4380
LVLHTARPGA PPPQPLDLQH RAQAGANTRP CPS
Length:4,383
Mass (Da):469,785
Last modified:April 5, 2011 - v1
Checksum:iF1EC661296F39FEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX000694 Genomic DNA. No translation available.
BX323857 Genomic DNA. No translation available.
CR450281 Genomic DNA. No translation available.
RefSeqiNP_032331.2. NM_008305.3.
UniGeneiMm.273662.

Genome annotation databases

EnsembliENSMUST00000171332; ENSMUSP00000131316; ENSMUSG00000028763.
GeneIDi15530.
KEGGimmu:15530.
UCSCiuc008vjc.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX000694 Genomic DNA. No translation available.
BX323857 Genomic DNA. No translation available.
CR450281 Genomic DNA. No translation available.
RefSeqiNP_032331.2. NM_008305.3.
UniGeneiMm.273662.

3D structure databases

ProteinModelPortaliE9PZ16.
SMRiE9PZ16. Positions 1769-1857, 4190-4383.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000131316.

Proteomic databases

MaxQBiE9PZ16.
PaxDbiE9PZ16.
PRIDEiE9PZ16.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000171332; ENSMUSP00000131316; ENSMUSG00000028763.
GeneIDi15530.
KEGGimmu:15530.
UCSCiuc008vjc.2. mouse.

Organism-specific databases

CTDi3339.
MGIiMGI:96257. Hspg2.

Phylogenomic databases

eggNOGiKOG3509. Eukaryota.
ENOG410XTD2. LUCA.
GeneTreeiENSGT00530000063501.
KOiK06255.
OMAiTCRNLHH.
TreeFamiTF326548.

Enzyme and pathway databases

ReactomeiR-MMU-1474228. Degradation of the extracellular matrix.
R-MMU-174800. Chylomicron-mediated lipid transport.
R-MMU-1971475. A tetrasaccharide linker sequence is required for GAG synthesis.
R-MMU-2022928. HS-GAG biosynthesis.
R-MMU-2024096. HS-GAG degradation.
R-MMU-216083. Integrin cell surface interactions.
R-MMU-3000157. Laminin interactions.
R-MMU-3000171. Non-integrin membrane-ECM interactions.
R-MMU-975634. Retinoid metabolism and transport.

Miscellaneous databases

ChiTaRSiHspg2. mouse.
NextBioi288458.
SOURCEiSearch...

Gene expression databases

BgeeiE9PZ16.
ExpressionAtlasiE9PZ16. baseline and differential.
GenevisibleiE9PZ16. MM.

Family and domain databases

Gene3Di2.60.120.200. 3 hits.
2.60.40.10. 22 hits.
4.10.400.10. 4 hits.
InterProiIPR013320. ConA-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003599. Ig_sub.
IPR003598. Ig_sub2.
IPR013106. Ig_V-set.
IPR002049. Laminin_EGF.
IPR001791. Laminin_G.
IPR000034. Laminin_IV.
IPR023415. LDLR_class-A_CS.
IPR002172. LDrepeatLR_classA_rpt.
IPR000082. SEA_dom.
[Graphical view]
PfamiPF00008. EGF. 2 hits.
PF07679. I-set. 12 hits.
PF00052. Laminin_B. 3 hits.
PF00053. Laminin_EGF. 9 hits.
PF00054. Laminin_G_1. 3 hits.
PF00057. Ldl_recept_a. 4 hits.
[Graphical view]
PRINTSiPR00261. LDLRECEPTOR.
SMARTiSM00181. EGF. 10 hits.
SM00179. EGF_CA. 5 hits.
SM00180. EGF_Lam. 9 hits.
SM00409. IG. 22 hits.
SM00408. IGc2. 22 hits.
SM00406. IGv. 8 hits.
SM00281. LamB. 3 hits.
SM00282. LamG. 3 hits.
SM00192. LDLa. 4 hits.
SM00200. SEA. 1 hit.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 22 hits.
SSF49899. SSF49899. 4 hits.
SSF57424. SSF57424. 4 hits.
PROSITEiPS00022. EGF_1. 9 hits.
PS01186. EGF_2. 6 hits.
PS50026. EGF_3. 4 hits.
PS01248. EGF_LAM_1. 11 hits.
PS50027. EGF_LAM_2. 8 hits.
PS50835. IG_LIKE. 22 hits.
PS50025. LAM_G_DOMAIN. 3 hits.
PS51115. LAMININ_IVA. 3 hits.
PS01209. LDLRA_1. 4 hits.
PS50068. LDLRA_2. 4 hits.
PS50024. SEA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9PZ16_MOUSE
AccessioniPrimary (citable) accession number: E9PZ16
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 11, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.