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E9PYU4

- E9PYU4_MOUSE

UniProt

E9PYU4 - E9PYU4_MOUSE

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Protein
Submitted name: Chromodomain-helicase-DNA-binding protein 5
Gene
Chd5
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. ATP-dependent helicase activity Source: InterPro
  3. DNA binding Source: InterPro
  4. zinc ion binding Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Chromodomain-helicase-DNA-binding protein 5Imported
Gene namesi
Name:Chd5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 4

Organism-specific databases

MGIiMGI:3036258. Chd5.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotations

PTM / Processingi

Proteomic databases

PRIDEiE9PYU4.

Expressioni

Gene expression databases

BgeeiE9PYU4.

Structurei

3D structure databases

ProteinModelPortaliE9PYU4.
SMRiE9PYU4. Positions 340-395, 415-470, 590-646.

Family & Domainsi

Keywords - Domaini

Zinc-fingerSAAS annotations

Phylogenomic databases

GeneTreeiENSGT00560000076896.
KOiK14435.

Family and domain databases

Gene3Di3.30.40.10. 2 hits.
3.40.50.300. 2 hits.
InterProiIPR028727. CHD5.
IPR012957. CHD_C2.
IPR012958. CHD_N.
IPR023780. Chromo_domain.
IPR000953. Chromo_domain/shadow.
IPR016197. Chromodomain-like.
IPR002464. DNA/RNA_helicase_DEAH_CS.
IPR009462. DUF1086.
IPR009463. DUF1087.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PANTHERiPTHR10799:SF583. PTHR10799:SF583. 1 hit.
PfamiPF08074. CHDCT2. 1 hit.
PF08073. CHDNT. 1 hit.
PF00385. Chromo. 2 hits.
PF06461. DUF1086. 1 hit.
PF06465. DUF1087. 1 hit.
PF00271. Helicase_C. 1 hit.
PF00628. PHD. 2 hits.
PF00176. SNF2_N. 1 hit.
[Graphical view]
SMARTiSM00298. CHROMO. 2 hits.
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00249. PHD. 2 hits.
SM00184. RING. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF54160. SSF54160. 3 hits.
SSF57903. SSF57903. 1 hit.
PROSITEiPS50013. CHROMO_2. 2 hits.
PS00690. DEAH_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS01359. ZF_PHD_1. 2 hits.
PS50016. ZF_PHD_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9PYU4-1 [UniParc]FASTAAdd to Basket

« Hide

MRGPLGTEEE LPRLFAEEME NEEEMSEEED GGLEGFEDFF PAEPVSLPKK     50
KPKKLKESKS SKGKRKKKEG SNDEMSDNEE DLEEKSESEG SDYSPTKKKK 100
KKLKEKKEKK EKKEKRKKRG EDEDDNDDGG LKEPKSSGQL MAEWGLDDVD 150
YLFSEDDYHT LTNYKAFSQF LRPLIAKKNP KIPMSKMMTV LGAKWREFSA 200
NNPFKGSSAA AAAAAVAAAV ETVTIAPPLA ISPQQVPQTL PIRKAKTKEG 250
KGPGVRKKNK GAKDSKKKGR GKRVAGLKFR FGGISKRKKG SSSEEDERED 300
SDLDNASIHS SSVRSECSAA LGKKNKRRRK KKRIDDGDGY ETDHQDYCEV 350
CQQGGEIILC DTCPRAYHLV CLDPELEKAP EGKWSCPHCE KEGIQWEPKD 400
DDEEEEEGGC EEEEDDHMEF CRVCKDGGEL LCCDACPSSY HLHCLNPPLP 450
EIPNGEWLCP RCTCPPLKGK VQRILHWRWT EPPAPFVVGL PGPEVEPGMP 500
PPRPLEGIPE REFFVKWAGL SYWHCSWVKE LQLELYHTVM YRNYQRKNDM 550
DEPPPFDYGS GDEDGKSEKR KNKDPLYAKM EERFYRYGIK PEWMMVHRIL 600
NHSFDKKGDI HYLIKWKDLP YDQCTWEIDE IDIPYYDNLK QAYWGHRELM 650
LGEDARLPKR LVKKGKKLKD DKQEKPPDTP IVDPTVKFDK QPWYIDATGG 700
TLHPYQLEGL NWLRFSWAQG TDTILADEMG LGKTVQTIVF LYSLYKEGHS 750
KGPYLVSAPL STIINWEREF EMWAPDFYVV TYTGDKESRS VIRENEFSFE 800
DNAIRGGKKV FRMKKEVQIK FHVLLTSYEL ITIDQAILGS IEWACLVVDE 850
AHRLKNNQSK FFRVLNSYKI DYKLLLTGTP LQNNLEELFH LLNFLTPERF 900
NNLEGFLEEF ADISKEDQIK KLHDLLGPHM LRRLKADVFK NMPAKTELIV 950
RVELSQMQKK YYKFILTRNF EALNSKGGGN QVSLLNIMMD LKKCCNHPYL 1000
FPVAAVEAPV LPNGSYDGSS LVKSSGKLML LQKMLKKLRD EGHRVLIFSQ 1050
MTKMLDLLED FLEYEGYKYE RIDGGITGGL RQEAIDRFNA PGAQQFCFLL 1100
STRAGGLGIN LATADTVIIY DSDWNPHNDI QAFSRAHRIG QNKKVMIYRF 1150
VTRASVEERI TQVAKRKMML THLVVRPGLG SKSGSMTKQE LDDILKFGTE 1200
ELFKDDVEGD NKDVEDSSVI HYDDAAISKL LDRNQDATDD TELQNMNEYL 1250
SSFKVAQYVV REEDGVEEVE REVIKQEENV DPDYWEKLLR HHYEQQQEDL 1300
ARNLGKGKRI RKQVNYNDAS QEDQEWQDEL SDNQSEYSIG SEDEDEDFEE 1350
RPEGQSGRRQ SRRQLKSDRD KPLPPLLARV GGNIEVLGFN ARQRKAFLNA 1400
IMRWGMPPQD AFNSHWLVRD LRGKSEKEFR AYVSLFMRHL CEPGADGAET 1450
FADGVPREGL SRQHVLTRIG VMSLVRKKVQ EFEHVNGKYS TPDLVPEGAE 1500
GKKPGEVISS DPNTPVPASP AQLPPAPLGL TDKMEAQLGY TDEKESGMQK 1550
PKKSLEIQTL PTALDRVEGE DKHQSSDSKD RAREERTEEV EKAQGSPEQP 1600
LKEEVLPDKE PIPDKPELSL GHSGDFRPDD PKTEEKEPGE TQQNGDREED 1650
EEGKKEDKNG KFKFMFNIAD GGFTELHTLW QNEERAAVSS GKIYEIWHRR 1700
HDYWLLAGIV THGYARWQDI QNDPRYMILN EPFKSEIHKG NYLEMKNKFL 1750
ARRFKLLEQA LVIEEQLRRA AYLNMTQDPN HPAMALNARL AEVECLAESH 1800
QHLSKESLAG NKPANAVLHK VLNQLEELLS DMKADVTRLP SMLSRIPPVA 1850
ARLQMSERSI LSRLTNRAGD PTIQQGAFGS SQMYNNSFGP NFRGPGPGGI 1900
VNYNQMPLGP YVTDI 1915
Length:1,915
Mass (Da):218,953
Last modified:April 5, 2011 - v1
Checksum:iA5E370E3CFB2A92C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL611985 Genomic DNA. No translation available.
RefSeqiNP_083492.2. NM_029216.2.
UniGeneiMm.40192.

Genome annotation databases

EnsembliENSMUST00000164662; ENSMUSP00000132600; ENSMUSG00000005045.
GeneIDi269610.
KEGGimmu:269610.
UCSCiuc012dqc.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL611985 Genomic DNA. No translation available.
RefSeqi NP_083492.2. NM_029216.2.
UniGenei Mm.40192.

3D structure databases

ProteinModelPortali E9PYU4.
SMRi E9PYU4. Positions 340-395, 415-470, 590-646.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi E9PYU4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000164662 ; ENSMUSP00000132600 ; ENSMUSG00000005045 .
GeneIDi 269610.
KEGGi mmu:269610.
UCSCi uc012dqc.1. mouse.

Organism-specific databases

CTDi 26038.
MGIi MGI:3036258. Chd5.

Phylogenomic databases

GeneTreei ENSGT00560000076896.
KOi K14435.

Miscellaneous databases

NextBioi 392923.
SOURCEi Search...

Gene expression databases

Bgeei E9PYU4.

Family and domain databases

Gene3Di 3.30.40.10. 2 hits.
3.40.50.300. 2 hits.
InterProi IPR028727. CHD5.
IPR012957. CHD_C2.
IPR012958. CHD_N.
IPR023780. Chromo_domain.
IPR000953. Chromo_domain/shadow.
IPR016197. Chromodomain-like.
IPR002464. DNA/RNA_helicase_DEAH_CS.
IPR009462. DUF1086.
IPR009463. DUF1087.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view ]
PANTHERi PTHR10799:SF583. PTHR10799:SF583. 1 hit.
Pfami PF08074. CHDCT2. 1 hit.
PF08073. CHDNT. 1 hit.
PF00385. Chromo. 2 hits.
PF06461. DUF1086. 1 hit.
PF06465. DUF1087. 1 hit.
PF00271. Helicase_C. 1 hit.
PF00628. PHD. 2 hits.
PF00176. SNF2_N. 1 hit.
[Graphical view ]
SMARTi SM00298. CHROMO. 2 hits.
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00249. PHD. 2 hits.
SM00184. RING. 2 hits.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 2 hits.
SSF54160. SSF54160. 3 hits.
SSF57903. SSF57903. 1 hit.
PROSITEi PS50013. CHROMO_2. 2 hits.
PS00690. DEAH_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS01359. ZF_PHD_1. 2 hits.
PS50016. ZF_PHD_2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9PYU4_MOUSE
AccessioniPrimary (citable) accession number: E9PYU4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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