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E9PX28

- E9PX28_MOUSE

UniProt

E9PX28 - E9PX28_MOUSE

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Protein
Submitted name:

Protein Pcdh10

Gene
Pcdh10
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain By similarity.SAAS annotations

GO - Molecular functioni

  1. calcium ion binding Source: InterPro

GO - Biological processi

  1. cell adhesion Source: MGI
  2. homophilic cell adhesion Source: MGI
Complete GO annotation...

Keywords - Biological processi

Cell adhesionSAAS annotations

Keywords - Ligandi

CalciumUniRule annotationSAAS annotations

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Pcdh10Imported
Gene namesi
Name:Pcdh10Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 3

Organism-specific databases

MGIiMGI:1338042. Pcdh10.

Subcellular locationi

GO - Cellular componenti

  1. integral component of plasma membrane Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotations, Membrane

PTM / Processingi

Proteomic databases

PRIDEiE9PX28.

Expressioni

Gene expression databases

ArrayExpressiE9PX28.
BgeeiE9PX28.

Structurei

3D structure databases

ProteinModelPortaliE9PX28.
SMRiE9PX28. Positions 18-680.

Family & Domainsi

Sequence similaritiesi

Contains cadherin domains.SAAS annotations

Keywords - Domaini

RepeatSAAS annotations, Transmembrane, Transmembrane helixSAAS annotations

Phylogenomic databases

GeneTreeiENSGT00750000117337.
KOiK16499.

Family and domain databases

Gene3Di2.60.40.60. 6 hits.
InterProiIPR002126. Cadherin.
IPR015919. Cadherin-like.
IPR020894. Cadherin_CS.
IPR013164. Cadherin_N.
[Graphical view]
PfamiPF00028. Cadherin. 4 hits.
PF08266. Cadherin_2. 1 hit.
[Graphical view]
PRINTSiPR00205. CADHERIN.
SMARTiSM00112. CA. 6 hits.
[Graphical view]
SUPFAMiSSF49313. SSF49313. 6 hits.
PROSITEiPS00232. CADHERIN_1. 5 hits.
PS50268. CADHERIN_2. 6 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9PX28-1 [UniParc]FASTAAdd to Basket

« Hide

MIVLLFFALL WMVDGVFSQL HYTVQEEQEH GTFVGNIAED LGLDITKLSA     50
RRFQTVANSR TPYLDLNLET GVLYVNEKID REQICKQSPS CVLHLEVFLE 100
NPLELFRVEI EVLDINDNPP SFPEPDLTVE ISESATPGTR FPLESAFDPD 150
VGTNSLRDYE ITPNSYFSLD VQTQGDGNRF AELVLEKPLD REQQAVHRYV 200
LTAVDGGGGG GGGEGGGGGG GAGLPPQQQR TGTALLTIRV LDSNDNVPAF 250
DQPVYTVSLP ENSPPGTLVI QLNATDPDEG QNGEVVYSFS SHISPRAREL 300
FGLSPRTGRL EVSGELDYEE SPVYQVYVQA KDLGPNAVPA HCKVLVRVLD 350
ANDNAPEISF STVKEAVSEG AAPGTVVALF SVTDRDSEEN GQVQCELLGD 400
VPFRLKSSFK NYYTIVTEAP LDREAGDSYT LTVVARDRGE PALSTSKSIQ 450
VQVSDVNDNA PRFSQPVYDV YVTENNVPGA YIYAVSATDR DEGANAKLTY 500
SILECQIQGM SVFTYVSINS DNGYLYALRS FDYEQIKDFS FQVEARDAGS 550
PQALAGNATV NILIVDQNDN APAIVAPLPG RNGTPAREVL PRSAEPGYLL 600
TRVAAVDADD GENARLTYSI VRGNEMNLFR LDWRTGELRT ARRVPAKRDP 650
QRPYELVIEV RDHGQPPLSS TATLVVQLVD GAVEPQGGGG DRGGGSGEHL 700
RPSRSGGGET SLDLTLILII ALGSVSFIFL LAMIVLAVRC QKEKKLNIYT 750
CLASDCCLCC CCCGNGSSTC CGRQARARKK KLSKSDIMLV QSANVPSNPA 800
QVPVEESGGF GSHHHNQNYC YQVCLTPESA KTDLMFLKPC SPSRSTDAEH 850
NPCGAIVTGY SDQQPDIISN GSILSNENKH QRAELSYLVD RPRRVNSSAF 900
QEADIVSSKD SGHGDSEQGD SDHDVTNRGQ SAGMDLFSNC TEECKALGHS 950
DRCWMPSFVP SDGRQAADYR SNLHVPGMDS VPDTEVFEPP EVQPGAERSF 1000
STFGKEKALH GTLERKELDG LLSNTRAPYK PPYLNHFHPL SCFAHWK 1047
Length:1,047
Mass (Da):113,993
Last modified:April 5, 2011 - v1
Checksum:i338378F1AB304303
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC108393 Genomic DNA. No translation available.
RefSeqiNP_001091642.1. NM_001098172.1.
UniGeneiMm.242644.

Genome annotation databases

EnsembliENSMUST00000171554; ENSMUSP00000131600; ENSMUSG00000049100.
GeneIDi18526.
KEGGimmu:18526.
UCSCiuc008pcy.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC108393 Genomic DNA. No translation available.
RefSeqi NP_001091642.1. NM_001098172.1.
UniGenei Mm.242644.

3D structure databases

ProteinModelPortali E9PX28.
SMRi E9PX28. Positions 18-680.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi E9PX28.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000171554 ; ENSMUSP00000131600 ; ENSMUSG00000049100 .
GeneIDi 18526.
KEGGi mmu:18526.
UCSCi uc008pcy.1. mouse.

Organism-specific databases

CTDi 57575.
MGIi MGI:1338042. Pcdh10.

Phylogenomic databases

GeneTreei ENSGT00750000117337.
KOi K16499.

Miscellaneous databases

NextBioi 294284.
SOURCEi Search...

Gene expression databases

ArrayExpressi E9PX28.
Bgeei E9PX28.

Family and domain databases

Gene3Di 2.60.40.60. 6 hits.
InterProi IPR002126. Cadherin.
IPR015919. Cadherin-like.
IPR020894. Cadherin_CS.
IPR013164. Cadherin_N.
[Graphical view ]
Pfami PF00028. Cadherin. 4 hits.
PF08266. Cadherin_2. 1 hit.
[Graphical view ]
PRINTSi PR00205. CADHERIN.
SMARTi SM00112. CA. 6 hits.
[Graphical view ]
SUPFAMi SSF49313. SSF49313. 6 hits.
PROSITEi PS00232. CADHERIN_1. 5 hits.
PS50268. CADHERIN_2. 6 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9PX28_MOUSE
AccessioniPrimary (citable) accession number: E9PX28
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi