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Protein

60S ribosomal protein L6

Gene

Rpl6l

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Enzyme and pathway databases

ReactomeiR-MMU-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-MMU-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-MMU-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-MMU-72689. Formation of a pool of free 40S subunits.
R-MMU-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-MMU-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-MMU-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L6UniRule annotation
Gene namesi
Name:Rpl6lImported
Synonyms:Gm5428Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Unplaced

Organism-specific databases

MGIiMGI:3647789. Rpl6l.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

MaxQBiE9PUX4.
PaxDbiE9PUX4.
PeptideAtlasiE9PUX4.
PRIDEiE9PUX4.

PTM databases

SwissPalmiE9PUX4.

Expressioni

Gene expression databases

BgeeiENSMUSG00000091086.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000131802.

Structurei

3D structure databases

ProteinModelPortaliE9PUX4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 103Ribosomal_L6e_NInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL6 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1694. Eukaryota.
COG2163. LUCA.
InParanoidiE9PUX4.
OMAiRGNERPH.
OrthoDBiEOG091G0L13.
PhylomeDBiE9PUX4.
TreeFamiTF300115.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiView protein in InterPro
IPR000915. 60S_ribosomal_L6E.
IPR014722. Rib_L2_dom2.
IPR005568. Ribosomal_L6_N.
IPR008991. Translation_prot_SH3-like.
PANTHERiPTHR10715. PTHR10715. 1 hit.
PfamiView protein in Pfam
PF01159. Ribosomal_L6e. 1 hit.
PF03868. Ribosomal_L6e_N. 1 hit.
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiView protein in PROSITE
PS01170. RIBOSOMAL_L6E. 1 hit.

Sequencei

Sequence statusi: Complete.

E9PUX4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGEKAPDTK EKKPATKKAG SDAAASRPWA AKVAKKVHPK GKKPKKAKPH
60 70 80 90 100
CSRNPVLVRG IGRYSRSAMY SRKALYKRKY SAAKTKVEKK KKKEKVLATV
110 120 130 140 150
TKTVGGDKNG GTRVVKLRKM PRYYPTEDVP RKLLSHGKKP FSQHVRRLRS
160 170 180 190 200
SITPRTLLII LAGRHRGKRV VFVKQLDSGL LLVTGPLVIN RVPLRRTHQK
210 220 230 240 250
FVIATSTKVD ISDVKIPKHL TDAYFKKKQL RKPRHQEGEI FDTEKEKYEI
260 270 280 290
TEQRKADQKA VDLQILPKIK AVPQLQGYLR SQFSLTNGMY PTIKSF
Length:296
Mass (Da):33,591
Last modified:April 5, 2011 - v1
Checksum:i445A558EB6486895
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC124399 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000171120; ENSMUSP00000131802; ENSMUSG00000091086.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC124399 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliE9PUX4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000131802.

PTM databases

SwissPalmiE9PUX4.

Proteomic databases

MaxQBiE9PUX4.
PaxDbiE9PUX4.
PeptideAtlasiE9PUX4.
PRIDEiE9PUX4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000171120; ENSMUSP00000131802; ENSMUSG00000091086.

Organism-specific databases

MGIiMGI:3647789. Rpl6l.

Phylogenomic databases

eggNOGiKOG1694. Eukaryota.
COG2163. LUCA.
InParanoidiE9PUX4.
OMAiRGNERPH.
OrthoDBiEOG091G0L13.
PhylomeDBiE9PUX4.
TreeFamiTF300115.

Enzyme and pathway databases

ReactomeiR-MMU-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-MMU-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-MMU-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-MMU-72689. Formation of a pool of free 40S subunits.
R-MMU-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-MMU-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-MMU-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000091086.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiView protein in InterPro
IPR000915. 60S_ribosomal_L6E.
IPR014722. Rib_L2_dom2.
IPR005568. Ribosomal_L6_N.
IPR008991. Translation_prot_SH3-like.
PANTHERiPTHR10715. PTHR10715. 1 hit.
PfamiView protein in Pfam
PF01159. Ribosomal_L6e. 1 hit.
PF03868. Ribosomal_L6e_N. 1 hit.
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiView protein in PROSITE
PS01170. RIBOSOMAL_L6E. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE9PUX4_MOUSE
AccessioniPrimary (citable) accession number: E9PUX4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: June 7, 2017
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.