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E9PUM0 (E9PUM0_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length245 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000125655

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from mutant phenotype PubMed 11707424. Source: MGI

DNA repair

Inferred from mutant phenotype PubMed 12466203. Source: MGI

UV protection

Inferred from mutant phenotype PubMed 10454634PubMed 16682947PubMed 8275084. Source: MGI

cell development

Inferred from mutant phenotype PubMed 10834928. Source: MGI

cell proliferation

Inferred from mutant phenotype PubMed 15692571. Source: MGI

cellular response to DNA damage stimulus

Inferred from mutant phenotype PubMed 11707424PubMed 15692571PubMed 15979950PubMed 9197240. Source: MGI

chromosome organization

Inferred from mutant phenotype PubMed 15199134. Source: MGI

double-strand break repair

Inferred from mutant phenotype PubMed 15199134PubMed 17912366. Source: MGI

germ cell development

Inferred from mutant phenotype PubMed 17912366. Source: MGI

interstrand cross-link repair

Inferred from mutant phenotype PubMed 23637614. Source: MGI

isotype switching

Inferred from mutant phenotype PubMed 15280420. Source: MGI

male gonad development

Inferred from mutant phenotype PubMed 17912366. Source: MGI

multicellular organism growth

Inferred from mutant phenotype PubMed 17183314PubMed 22323595. Source: MGI

multicellular organismal aging

Inferred from mutant phenotype PubMed 17183314. Source: MGI

nucleotide-excision repair

Inferred from mutant phenotype PubMed 8275084. Source: MGI

oogenesis

Inferred from mutant phenotype PubMed 12466203. Source: MGI

post-embryonic hemopoiesis

Inferred from mutant phenotype PubMed 15692571. Source: MGI

pyrimidine dimer repair by nucleotide-excision repair

Inferred from mutant phenotype PubMed 10454634. Source: MGI

replicative cell aging

Inferred from mutant phenotype PubMed 17173483PubMed 9197240. Source: MGI

response to X-ray

Inferred from mutant phenotype PubMed 15979950. Source: MGI

spermatogenesis

Inferred from mutant phenotype PubMed 12466203. Source: MGI

syncytium formation

Inferred from mutant phenotype PubMed 10834928. Source: MGI

   Cellular_componentnucleotide-excision repair complex

Inferred from sequence orthology PubMed 3290851. Source: MGI

transcription factor TFIID complex

Inferred from direct assay PubMed 22323595. Source: MGI

   Molecular_functionTBP-class protein binding

Inferred from physical interaction PubMed 22323595. Source: MGI

TFIID-class transcription factor binding

Inferred from direct assay PubMed 22323595. Source: MGI

damaged DNA binding

Inferred from electronic annotation. Source: InterPro

endonuclease activity

Inferred from electronic annotation. Source: InterPro

protein binding

Inferred from physical interaction PubMed 22234173. Source: MGI

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E9PUM0 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 1AA0DD8EED2EE0B2

FASTA24526,948
        10         20         30         40         50         60 
MDPGKDEESR PQPSGPPTRR KFVIPLEEEE VPCAGVKPLF RSSRNPTIPA TSAHVAPQTY 

        70         80         90        100        110        120 
AEYAITQPPG GAGATVPTGS EPAAGENPSQ TLKTGAKSNS IIVSPRQRGN PVLKFVRNVP 

       130        140        150        160        170        180 
WEFGEVIPDY VLGQSTCALF LSLRYHNLHP DYIHERLQSL GKNFALRVLL VQVDVKDPQQ 

       190        200        210        220        230        240 
ALKELAKMCI LADCTLVLAW SAEEAGRYLE TYKAYEQKPA DLLMEKLEQN FLSRVSLCLL 


SSCTS 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC148988 Genomic DNA. No translation available.
RefSeqNP_001120796.1. NM_001127324.1.
UniGeneMm.280913.

3D structure databases

ProteinModelPortalE9PUM0.
SMRE9PUM0. Positions 99-227.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEE9PUM0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000160369; ENSMUSP00000125655; ENSMUSG00000003549.
GeneID13870.
KEGGmmu:13870.
UCSCuc009fll.2. mouse.

Organism-specific databases

CTD2067.
MGIMGI:95412. Ercc1.

Phylogenomic databases

GeneTreeENSGT00390000011275.
KOK10849.

Gene expression databases

ArrayExpressE9PUM0.
BgeeE9PUM0.

Family and domain databases

InterProIPR004579. DNA_repair_Rad10.
IPR011335. Restrct_endonuc-II-like.
[Graphical view]
PfamPF03834. Rad10. 1 hit.
[Graphical view]
ProDomPD013585. DNA_repair_Rad10. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF52980. SSF52980. 1 hit.
TIGRFAMsTIGR00597. rad10. 1 hit.
ProtoNetSearch...

Other

ChiTaRSERCC1. mouse.
NextBio284784.
SOURCESearch...

Entry information

Entry nameE9PUM0_MOUSE
AccessionPrimary (citable) accession number: E9PUM0
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)