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Protein
Submitted name:

DNA excision repair protein ERCC-1

Gene

Ercc1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
DNA excision repair protein ERCC-1Imported
Gene namesi
Name:Ercc1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:95412. Ercc1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiE9PUM0.
PeptideAtlasiE9PUM0.
PRIDEiE9PUM0.

Expressioni

Gene expression databases

BgeeiE9PUM0.
ExpressionAtlasiE9PUM0. baseline and differential.
GenevisibleiE9PUM0. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000003645.

Structurei

3D structure databases

ProteinModelPortaliE9PUM0.
SMRiE9PUM0. Positions 99-227.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG2841. Eukaryota.
COG5241. LUCA.
GeneTreeiENSGT00390000011275.

Family and domain databases

InterProiIPR004579. ERCC1/RAD10/SWI10.
IPR011335. Restrct_endonuc-II-like.
[Graphical view]
ProDomiPD013585. DNA_repair_Rad10. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF52980. SSF52980. 1 hit.
TIGRFAMsiTIGR00597. rad10. 1 hit.

Sequencei

Sequence statusi: Complete.

E9PUM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPGKDEESR PQPSGPPTRR KFVIPLEEEE VPCAGVKPLF RSSRNPTIPA
60 70 80 90 100
TSAHVAPQTY AEYAITQPPG GAGATVPTGS EPAAGENPSQ TLKTGAKSNS
110 120 130 140 150
IIVSPRQRGN PVLKFVRNVP WEFGEVIPDY VLGQSTCALF LSLRYHNLHP
160 170 180 190 200
DYIHERLQSL GKNFALRVLL VQVDVKDPQQ ALKELAKMCI LADCTLVLAW
210 220 230 240
SAEEAGRYLE TYKAYEQKPA DLLMEKLEQN FLSRVSLCLL SSCTS
Length:245
Mass (Da):26,948
Last modified:April 5, 2011 - v1
Checksum:i1AA0DD8EED2EE0B2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC148988 Genomic DNA. No translation available.
RefSeqiNP_001120796.1. NM_001127324.1.
UniGeneiMm.280913.

Genome annotation databases

EnsembliENSMUST00000160369; ENSMUSP00000125655; ENSMUSG00000003549.
GeneIDi13870.
UCSCiuc009fll.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC148988 Genomic DNA. No translation available.
RefSeqiNP_001120796.1. NM_001127324.1.
UniGeneiMm.280913.

3D structure databases

ProteinModelPortaliE9PUM0.
SMRiE9PUM0. Positions 99-227.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000003645.

Proteomic databases

PaxDbiE9PUM0.
PeptideAtlasiE9PUM0.
PRIDEiE9PUM0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000160369; ENSMUSP00000125655; ENSMUSG00000003549.
GeneIDi13870.
UCSCiuc009fll.2. mouse.

Organism-specific databases

CTDi2067.
MGIiMGI:95412. Ercc1.

Phylogenomic databases

eggNOGiKOG2841. Eukaryota.
COG5241. LUCA.
GeneTreeiENSGT00390000011275.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiE9PUM0.
ExpressionAtlasiE9PUM0. baseline and differential.
GenevisibleiE9PUM0. MM.

Family and domain databases

InterProiIPR004579. ERCC1/RAD10/SWI10.
IPR011335. Restrct_endonuc-II-like.
[Graphical view]
ProDomiPD013585. DNA_repair_Rad10. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF52980. SSF52980. 1 hit.
TIGRFAMsiTIGR00597. rad10. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE9PUM0_MOUSE
AccessioniPrimary (citable) accession number: E9PUM0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 6, 2016
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.