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E9PTE0

- E9PTE0_RAT

UniProt

E9PTE0 - E9PTE0_RAT

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Protein
Submitted name:

Protein Ints10

Gene

Ints10

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Biological processi

  1. snRNA processing Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Ints10Imported
Gene namesi
Name:Ints10Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 16

Organism-specific databases

RGDi1304711. Ints10.

Subcellular locationi

GO - Cellular componenti

  1. integrator complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000010950.
InParanoidiE9PTE0.
OMAiYMVLPIQ.
OrthoDBiEOG7DC23X.
TreeFamiTF323935.

Family and domain databases

InterProiIPR026164. Int_cplx_su10.
[Graphical view]
PANTHERiPTHR16055. PTHR16055. 1 hit.
PRINTSiPR02106. INTSUBUNIT10.

Sequencei

Sequence statusi: Complete.

E9PTE0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSAQGDCEFL VQRARELVPQ DLWAAKAWLI TARSLYPADF NIQYEMYTIE
60 70 80 90 100
RNAERTATAG RLLYDMFVNF PDQPVVWREI SIITSALRND SQDKQTQFLR
110 120 130 140 150
SLFETLPGRV QCEMLLKVTE QCFNTLERSE MLLLLLRRFP ETVVQHGVGL
160 170 180 190 200
GEALLEAETI EEQESPVNCF RKLFVCDVLP LIINNHDVRL PANLLYKYLN
210 220 230 240 250
KAAEFYINYV TRSTQLENQH QGAPDTSDLM SPSKRSSQKY IIEGLTEKSS
260 270 280 290 300
HIVDPWERLF KILNVVGMRC EWQMDKGRRS CSDMLHRMKE LCRYMNSFDS
310 320 330 340 350
EAHTKYKNQV LYSTMLVLFK SAFQYISSIQ PSLFQGPNAP SQVPLVLLED
360 370 380 390 400
VANVYGDVEI DRSKHIHKKR KLAEGREKTM XXDDEECSAK GRNRHIVVSK
410 420 430 440 450
ADLSNSIEVL ESFKLARESW ELLYSLEFLD KEFTRICLAW KTDTWLWLRI
460 470 480 490 500
FLTDMIIYQG QYKKAIASLH HLAALQGSLS QPQITGQGTL EHQRALIQLA
510 520 530 540 550
TCHFALGEYR MTCEKVLDLM CYMVLPIQDG GKSQEEPSKV KPKCRKGLDL
560 570 580 590 600
KLLPCTSKAI MPYCLHLMLA CFKLRAFTDN RDDMALGHVI VLLQQEWPRG
610 620 630 640 650
ENLFLKAISK ICQQGNFQYE NFFSYVTNID MLEEFAYLRT QEGGKIHLEL
660 670 680 690 700
LPNQGMLIKH HTVTRGITKG VKEDFRLAME RQVSRCGENL MVVLHRFCIN
710
EKILLLQTLT
Length:710
Mass (Da):82,108
Last modified:April 3, 2013 - v2
Checksum:i9C20A59A7DD54F83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06086984 Genomic DNA. No translation available.
AABR06086985 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000016980; ENSRNOP00000016980; ENSRNOG00000012429.
UCSCiRGD:1304711. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06086984 Genomic DNA. No translation available.
AABR06086985 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000016980 ; ENSRNOP00000016980 ; ENSRNOG00000012429 .
UCSCi RGD:1304711. rat.

Organism-specific databases

RGDi 1304711. Ints10.

Phylogenomic databases

GeneTreei ENSGT00390000010950.
InParanoidi E9PTE0.
OMAi YMVLPIQ.
OrthoDBi EOG7DC23X.
TreeFami TF323935.

Miscellaneous databases

NextBioi 35575027.

Family and domain databases

InterProi IPR026164. Int_cplx_su10.
[Graphical view ]
PANTHERi PTHR16055. PTHR16055. 1 hit.
PRINTSi PR02106. INTSUBUNIT10.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiE9PTE0_RAT
AccessioniPrimary (citable) accession number: E9PTE0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 3, 2013
Last modified: October 29, 2014
This is version 22 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3