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E9PTE0

- E9PTE0_RAT

UniProt

E9PTE0 - E9PTE0_RAT

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Protein
Submitted name: Protein Ints10
Gene
Ints10
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Biological processi

  1. snRNA processing Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Ints10Imported
Gene namesi
Name:Ints10Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 16

Organism-specific databases

RGDi1304711. Ints10.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: Ensembl
  2. integrator complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000010950.
OMAiYMVLPIQ.
OrthoDBiEOG7DC23X.
TreeFamiTF323935.

Family and domain databases

InterProiIPR026164. Int_cplx_su10.
[Graphical view]
PANTHERiPTHR16055. PTHR16055. 1 hit.
PRINTSiPR02106. INTSUBUNIT10.

Sequencei

Sequence statusi: Complete.

E9PTE0-1 [UniParc]FASTAAdd to Basket

« Hide

MSAQGDCEFL VQRARELVPQ DLWAAKAWLI TARSLYPADF NIQYEMYTIE    50
RNAERTATAG RLLYDMFVNF PDQPVVWREI SIITSALRND SQDKQTQFLR 100
SLFETLPGRV QCEMLLKVTE QCFNTLERSE MLLLLLRRFP ETVVQHGVGL 150
GEALLEAETI EEQESPVNCF RKLFVCDVLP LIINNHDVRL PANLLYKYLN 200
KAAEFYINYV TRSTQLENQH QGAPDTSDLM SPSKRSSQKY IIEGLTEKSS 250
HIVDPWERLF KILNVVGMRC EWQMDKGRRS CSDMLHRMKE LCRYMNSFDS 300
EAHTKYKNQV LYSTMLVLFK SAFQYISSIQ PSLFQGPNAP SQVPLVLLED 350
VANVYGDVEI DRSKHIHKKR KLAEGREKTM XXDDEECSAK GRNRHIVVSK 400
ADLSNSIEVL ESFKLARESW ELLYSLEFLD KEFTRICLAW KTDTWLWLRI 450
FLTDMIIYQG QYKKAIASLH HLAALQGSLS QPQITGQGTL EHQRALIQLA 500
TCHFALGEYR MTCEKVLDLM CYMVLPIQDG GKSQEEPSKV KPKCRKGLDL 550
KLLPCTSKAI MPYCLHLMLA CFKLRAFTDN RDDMALGHVI VLLQQEWPRG 600
ENLFLKAISK ICQQGNFQYE NFFSYVTNID MLEEFAYLRT QEGGKIHLEL 650
LPNQGMLIKH HTVTRGITKG VKEDFRLAME RQVSRCGENL MVVLHRFCIN 700
EKILLLQTLT 710
Length:710
Mass (Da):82,108
Last modified:April 3, 2013 - v2
Checksum:i9C20A59A7DD54F83
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06086984 Genomic DNA. No translation available.
AABR06086985 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000016980; ENSRNOP00000016980; ENSRNOG00000012429.
UCSCiRGD:1304711. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06086984 Genomic DNA. No translation available.
AABR06086985 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000016980 ; ENSRNOP00000016980 ; ENSRNOG00000012429 .
UCSCi RGD:1304711. rat.

Organism-specific databases

RGDi 1304711. Ints10.

Phylogenomic databases

GeneTreei ENSGT00390000010950.
OMAi YMVLPIQ.
OrthoDBi EOG7DC23X.
TreeFami TF323935.

Miscellaneous databases

NextBioi 35575027.

Family and domain databases

InterProi IPR026164. Int_cplx_su10.
[Graphical view ]
PANTHERi PTHR16055. PTHR16055. 1 hit.
PRINTSi PR02106. INTSUBUNIT10.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiE9PTE0_RAT
AccessioniPrimary (citable) accession number: E9PTE0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 3, 2013
Last modified: February 19, 2014
This is version 20 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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