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E9PTE0

- E9PTE0_RAT

UniProt

E9PTE0 - E9PTE0_RAT

Protein
Submitted name:

Protein Ints10

Gene

Ints10

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. snRNA processing Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Ints10Imported
    Gene namesi
    Name:Ints10Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 16

    Organism-specific databases

    RGDi1304711. Ints10.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: Ensembl
    2. integrator complex Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000010950.
    OMAiYMVLPIQ.
    OrthoDBiEOG7DC23X.
    TreeFamiTF323935.

    Family and domain databases

    InterProiIPR026164. Int_cplx_su10.
    [Graphical view]
    PANTHERiPTHR16055. PTHR16055. 1 hit.
    PRINTSiPR02106. INTSUBUNIT10.

    Sequencei

    Sequence statusi: Complete.

    E9PTE0-1 [UniParc]FASTAAdd to Basket

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    MSAQGDCEFL VQRARELVPQ DLWAAKAWLI TARSLYPADF NIQYEMYTIE    50
    RNAERTATAG RLLYDMFVNF PDQPVVWREI SIITSALRND SQDKQTQFLR 100
    SLFETLPGRV QCEMLLKVTE QCFNTLERSE MLLLLLRRFP ETVVQHGVGL 150
    GEALLEAETI EEQESPVNCF RKLFVCDVLP LIINNHDVRL PANLLYKYLN 200
    KAAEFYINYV TRSTQLENQH QGAPDTSDLM SPSKRSSQKY IIEGLTEKSS 250
    HIVDPWERLF KILNVVGMRC EWQMDKGRRS CSDMLHRMKE LCRYMNSFDS 300
    EAHTKYKNQV LYSTMLVLFK SAFQYISSIQ PSLFQGPNAP SQVPLVLLED 350
    VANVYGDVEI DRSKHIHKKR KLAEGREKTM XXDDEECSAK GRNRHIVVSK 400
    ADLSNSIEVL ESFKLARESW ELLYSLEFLD KEFTRICLAW KTDTWLWLRI 450
    FLTDMIIYQG QYKKAIASLH HLAALQGSLS QPQITGQGTL EHQRALIQLA 500
    TCHFALGEYR MTCEKVLDLM CYMVLPIQDG GKSQEEPSKV KPKCRKGLDL 550
    KLLPCTSKAI MPYCLHLMLA CFKLRAFTDN RDDMALGHVI VLLQQEWPRG 600
    ENLFLKAISK ICQQGNFQYE NFFSYVTNID MLEEFAYLRT QEGGKIHLEL 650
    LPNQGMLIKH HTVTRGITKG VKEDFRLAME RQVSRCGENL MVVLHRFCIN 700
    EKILLLQTLT 710
    Length:710
    Mass (Da):82,108
    Last modified:April 3, 2013 - v2
    Checksum:i9C20A59A7DD54F83
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06086984 Genomic DNA. No translation available.
    AABR06086985 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSRNOT00000016980; ENSRNOP00000016980; ENSRNOG00000012429.
    UCSCiRGD:1304711. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06086984 Genomic DNA. No translation available.
    AABR06086985 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000016980 ; ENSRNOP00000016980 ; ENSRNOG00000012429 .
    UCSCi RGD:1304711. rat.

    Organism-specific databases

    RGDi 1304711. Ints10.

    Phylogenomic databases

    GeneTreei ENSGT00390000010950.
    OMAi YMVLPIQ.
    OrthoDBi EOG7DC23X.
    TreeFami TF323935.

    Miscellaneous databases

    NextBioi 35575027.

    Family and domain databases

    InterProi IPR026164. Int_cplx_su10.
    [Graphical view ]
    PANTHERi PTHR16055. PTHR16055. 1 hit.
    PRINTSi PR02106. INTSUBUNIT10.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiE9PTE0_RAT
    AccessioniPrimary (citable) accession number: E9PTE0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 21 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3