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Protein
Submitted name:

RNA-binding protein 25

Gene

RBM25

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein 25Imported
Gene namesi
Name:RBM25Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 14

Organism-specific databases

HGNCiHGNC:23244. RBM25.

PTM / Processingi

Proteomic databases

PaxDbiE9PQU5.
PeptideAtlasiE9PQU5.

Expressioni

Gene expression databases

BgeeiENSG00000119707.
ExpressionAtlasiE9PQU5. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000261973.

Structurei

3D structure databases

ProteinModelPortaliE9PQU5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini87 – 16478RRM (RNA recognition motif)InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2253. Eukaryota.
ENOG410ZRGA. LUCA.
GeneTreeiENSGT00730000111019.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

E9PQU5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFPPHLNRP PMGIPALPPG IPPPQFPGFP PPVPPGTPMI PVPMSIMAPA
60 70 80 90 100
PTVLVPTVSM VGKHLGARKD HPGLKAKEND ENCGPTTTVF VGNISEKASD
110 120 130 140 150
MLIRQLLAKC GLVLSWKRVQ GASGKLQAFG FCEYKEPEST LRALRLLHDL
160 170 180 190 200
QIGEKKLLVK VDAKTKAQLD EWKAKKKASN GNARPETVTN DDEEALDEET
210 220 230 240
KRRDQMIKGA IEVLIREYSS ELNAPSQESD SHPRKKKKEK KED
Length:243
Mass (Da):26,719
Last modified:April 5, 2011 - v1
Checksum:iACFCEDC363B5E270
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei243 – 2431Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004858 Genomic DNA. No translation available.
AL442663 Genomic DNA. No translation available.
KF455937 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000531500; ENSP00000434333; ENSG00000119707.
UCSCiuc059daq.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004858 Genomic DNA. No translation available.
AL442663 Genomic DNA. No translation available.
KF455937 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliE9PQU5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000261973.

Proteomic databases

PaxDbiE9PQU5.
PeptideAtlasiE9PQU5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000531500; ENSP00000434333; ENSG00000119707.
UCSCiuc059daq.1. human.

Organism-specific databases

HGNCiHGNC:23244. RBM25.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2253. Eukaryota.
ENOG410ZRGA. LUCA.
GeneTreeiENSGT00730000111019.

Miscellaneous databases

ChiTaRSiRBM25. human.

Gene expression databases

BgeeiENSG00000119707.
ExpressionAtlasiE9PQU5. baseline and differential.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiE9PQU5_HUMAN
AccessioniPrimary (citable) accession number: E9PQU5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: September 7, 2016
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.