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E9PQL4

- E9PQL4_HUMAN

UniProt

E9PQL4 - E9PQL4_HUMAN

Protein
Submitted name:

Transcription factor SOX-6

Gene

SOX6

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
  1. Functioni

    GO - Molecular functioni

    1. sequence-specific DNA binding Source: Ensembl
    2. sequence-specific DNA binding transcription factor activity Source: Ensembl
    3. transcription regulatory region DNA binding Source: Ensembl

    GO - Biological processi

    1. astrocyte differentiation Source: Ensembl
    2. cardiocyte differentiation Source: Ensembl
    3. cartilage development Source: Ensembl
    4. cell morphogenesis Source: Ensembl
    5. erythrocyte development Source: Ensembl
    6. gene silencing Source: Ensembl
    7. in utero embryonic development Source: Ensembl
    8. muscle cell differentiation Source: Ensembl
    9. negative regulation of transcription from RNA polymerase II promoter Source: Ensembl
    10. oligodendrocyte cell fate specification Source: Ensembl
    11. positive regulation of chondrocyte differentiation Source: Ensembl
    12. positive regulation of transcription from RNA polymerase II promoter Source: Ensembl
    13. post-embryonic development Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcription factor SOX-6Imported
    Gene namesi
    Name:SOX6Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 11

    Organism-specific databases

    HGNCiHGNC:16421. SOX6.

    Expressioni

    Gene expression databases

    ArrayExpressiE9PQL4.
    BgeeiE9PQL4.

    Structurei

    3D structure databases

    ProteinModelPortaliE9PQL4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    InterProiIPR029548. SOX-9.
    [Graphical view]
    PANTHERiPTHR10270:SF212. PTHR10270:SF212. 1 hit.

    Sequencei

    Sequence statusi: Fragment.

    E9PQL4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSSKQATSPF ACAADGEDAM TQDLTSREKE EGSDQHVASH LPLHPIMHNK    50
    PHSEELPTLV STIQQDADWD SVLSSQQRME SENNKLCSLY SFRNTSTSPH 100
    KPDEGSRDRE IMTSVTFGTP ERRKGSLADV VDTLKQKKLE EMTRTEQEDS 150
    SCMEKLLSK 159
    Length:159
    Mass (Da):17,842
    Last modified:April 5, 2011 - v1
    Checksum:i02ED44D3B2A502EB
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei159 – 1591Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC009869 Genomic DNA. No translation available.
    AC013595 Genomic DNA. No translation available.
    AC026639 Genomic DNA. No translation available.
    AC027016 Genomic DNA. No translation available.
    AC068405 Genomic DNA. No translation available.
    AC100865 Genomic DNA. No translation available.
    AC103794 Genomic DNA. No translation available.
    KF510365 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000533411; ENSP00000436170; ENSG00000110693.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC009869 Genomic DNA. No translation available.
    AC013595 Genomic DNA. No translation available.
    AC026639 Genomic DNA. No translation available.
    AC027016 Genomic DNA. No translation available.
    AC068405 Genomic DNA. No translation available.
    AC100865 Genomic DNA. No translation available.
    AC103794 Genomic DNA. No translation available.
    KF510365 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali E9PQL4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000533411 ; ENSP00000436170 ; ENSG00000110693 .

    Organism-specific databases

    HGNCi HGNC:16421. SOX6.
    GenAtlasi Search...

    Miscellaneous databases

    ChiTaRSi SOX6. human.
    NextBioi 35504430.

    Gene expression databases

    ArrayExpressi E9PQL4.
    Bgeei E9PQL4.

    Family and domain databases

    InterProi IPR029548. SOX-9.
    [Graphical view ]
    PANTHERi PTHR10270:SF212. PTHR10270:SF212. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiE9PQL4_HUMAN
    AccessioniPrimary (citable) accession number: E9PQL4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3