E9PQL4 (E9PQL4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcription factor SOX-6 Ensembl ENSP00000436170

Gene names

Name:

SOX6 Ensembl ENSP00000436170

Organism

Homo sapiens (Human) [Reference proteome] Ensembl ENSP00000436170

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	159 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000436170

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cardiocyte differentiation Inferred from electronic annotation. Source: Compara cartilage development Inferred from electronic annotation. Source: Compara cell morphogenesis Inferred from electronic annotation. Source: Compara erythrocyte development Inferred from electronic annotation. Source: Compara gene silencing Inferred from electronic annotation. Source: Compara in utero embryonic development Inferred from electronic annotation. Source: Compara muscle cell differentiation Inferred from electronic annotation. Source: Compara negative regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara oligodendrocyte cell fate specification Inferred from electronic annotation. Source: Compara positive regulation of chondrocyte differentiation Inferred from electronic annotation. Source: Compara positive regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara post-embryonic development Inferred from electronic annotation. Source: Compara
Molecular_function	sequence-specific DNA binding Inferred from electronic annotation. Source: Compara sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: Compara transcription regulatory region DNA binding Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	159	1	Ensembl ENSP00000436170

Sequences

	Sequence		Length	Mass (Da)
	E9PQL4 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: 02ED44D3B2A502EB	FASTA	159	17,842
	10 20 30 40 50 60 MSSKQATSPF ACAADGEDAM TQDLTSREKE EGSDQHVASH LPLHPIMHNK PHSEELPTLV 70 80 90 100 110 120 STIQQDADWD SVLSSQQRME SENNKLCSLY SFRNTSTSPH KPDEGSRDRE IMTSVTFGTP 130 140 150 ERRKGSLADV VDTLKQKKLE EMTRTEQEDS SCMEKLLSK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Human chromosome 11 DNA sequence and analysis including novel gene identification." Taylor T.D., Noguchi H., Totoki Y., Toyoda A., Kuroki Y., Dewar K., Lloyd C., Itoh T., Takeda T., Kim D.W., She X., Barlow K.F., Bloom T., Bruford E., Chang J.L., Cuomo C.A., Eichler E., FitzGerald M.G. , Jaffe D.B., LaButti K., Nicol R., Park H.S., Seaman C., Sougnez C., Yang X., Zimmer A.R., Zody M.C., Birren B.W., Nusbaum C., Fujiyama A., Hattori M., Rogers J., Lander E.S., Sakaki Y. Nature 440:497-500(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC009869 Genomic DNA. No translation available. AC013595 Genomic DNA. No translation available. AC026639 Genomic DNA. No translation available. AC027016 Genomic DNA. No translation available. AC068405 Genomic DNA. No translation available. AC100865 Genomic DNA. No translation available. AC103794 Genomic DNA. No translation available.
IPI	IPI00981950.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000533411; ENSP00000436170; ENSG00000110693.
Organism-specific databases
HGNC	HGNC:16421. SOX6.
GenAtlas	Search...
Gene expression databases
ArrayExpress	E9PQL4.
Bgee	E9PQL4.
Family and domain databases
InterPro	IPR027153. Sox-6. [Graphical view]
PANTHER	PTHR10270:SF89. PTHR10270:SF89. 1 hit.
ProtoNet	Search...
Other
ChiTaRS	SOX6. human.
NextBio	35504430.

Entry information

Entry name

E9PQL4_HUMAN

Accession

Primary (citable) accession number: E9PQL4

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.