E9PP16 (E9PP16_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Liprin-beta-2 Ensembl ENSP00000436498

Gene names

Name:

PPFIBP2 Ensembl ENSP00000436498

Organism

Homo sapiens (Human) [Reference proteome] Ensembl ENSP00000436498

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	718 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000436498

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro integrase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E9PP16 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: 81CBADCB5D85924C	FASTA	718	81,380
	10 20 30 40 50 60 MLQQELLSRT SLETQKLDLM TEVSELKLKL VGMEKEQREQ EEKQRKAEEL LQELRHLKIK 70 80 90 100 110 120 VEELENERNQ YEWKLKATKA EVAQLQEQVA LKDAEIERLH SQLSRTAALH SESHTERDQE 130 140 150 160 170 180 IQRLKMGMET LLLANEDKDR RIEELTGLLN QYRKVKEIVM VTQGPSERTL SINEEEPEGG 190 200 210 220 230 240 FSKWNATNKD PEELFKQEMP PRCSSPTVGP PPLPQKSLET RAQKKLSCSL EDLRSESVDK 250 260 270 280 290 300 CMDGNQPFPV LEPKDSPFLA EHKYPTLPGK LSGATPNGEA AKSPPTICQP DATGSSLLRL 310 320 330 340 350 360 RDTESGWDDT AVVNDLSSTS SGTESGPQSP LTPDGKRNPK GIKKFWGKIR RTQSGNFYTD 370 380 390 400 410 420 TLGMAEFRRG GLRATAGPRL SRTRDSKGQK SDANAPFAQW STERVCAWLE DFGLAQYVIF 430 440 450 460 470 480 ARQWVSSGHT LLTATPQDME KELGIKHPLH RKKLVLAVKA INTKQEEKSA LLDHIWVTRW 490 500 510 520 530 540 LDDIGLPQYK DQFHESRVDR RMLQYLTVND LLFLKVTSQL HHLSIKCAIH VLHVNKFNPH 550 560 570 580 590 600 CLHRRPADES NLSPSEVVQW SNHRVMEWLR SVDLAEYAPN LRGSGVHGGL IILEPRFTGD 610 620 630 640 650 660 TLAMLLNIPP QKTLLRRHLT TKFNALIGPE AEQEKREKMA SPAYTPLTTT AKVRPRKLGF 670 680 690 700 710 SHFGNIRKKK FDESTDYICP MEPSDGVSDS HRVYSGYRGL SPLDAPELDG LDQVGQIS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Human chromosome 11 DNA sequence and analysis including novel gene identification." Taylor T.D., Noguchi H., Totoki Y., Toyoda A., Kuroki Y., Dewar K., Lloyd C., Itoh T., Takeda T., Kim D.W., She X., Barlow K.F., Bloom T., Bruford E., Chang J.L., Cuomo C.A., Eichler E., FitzGerald M.G. , Jaffe D.B., LaButti K., Nicol R., Park H.S., Seaman C., Sougnez C., Yang X., Zimmer A.R., Zody M.C., Birren B.W., Nusbaum C., Fujiyama A., Hattori M., Rogers J., Lander E.S., Sakaki Y. Nature 440:497-500(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC104237 Genomic DNA. No translation available. AC107884 Genomic DNA. No translation available.
IPI	IPI01013181.
3D structure databases
ProteinModelPortal	E9PP16.
SMR	E9PP16. Positions 40-105, 396-647.
ModBase	Search...
Proteomic databases
PRIDE	E9PP16.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000533792; ENSP00000436498; ENSG00000166387.
UCSC	uc010rbd.1. human.
Organism-specific databases
HGNC	HGNC:9250. PPFIBP2.
GenAtlas	Search...
Gene expression databases
ArrayExpress	E9PP16.
Bgee	E9PP16.
Family and domain databases
Gene3D	1.10.150.50. 2 hits.
InterPro	IPR004191. Integrase_Tn916-type_DNA-bd_N. IPR001660. SAM. IPR013761. SAM/pointed. IPR011510. SAM_2. IPR021129. SAM_type1. [Graphical view]
Pfam	PF02920. Integrase_DNA. 1 hit. PF00536. SAM_1. 2 hits. PF07647. SAM_2. 1 hit. [Graphical view]
SMART	SM00454. SAM. 3 hits. [Graphical view]
SUPFAM	SSF47769. SAM_homology. 3 hits.
PROSITE	PS50105. SAM_DOMAIN. 3 hits. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	PPFIBP2. human.
NextBio	35503983.

Entry information

Entry name

E9PP16_HUMAN

Accession

Primary (citable) accession number: E9PP16

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.