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Protein
Submitted name:

Caprin-1

Gene

CAPRIN1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Caprin-1Imported
Gene namesi
Name:CAPRIN1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

HGNCiHGNC:6743. CAPRIN1.

PTM / Processingi

Proteomic databases

EPDiE9PLA9.
PaxDbiE9PLA9.

Expressioni

Gene expression databases

BgeeiE9PLA9.
ExpressionAtlasiE9PLA9. baseline and differential.

Interactioni

Protein-protein interaction databases

IntActiE9PLA9. 1 interaction.
MINTiMINT-8395047.
STRINGi9606.ENSP00000340329.

Structurei

3D structure databases

ProteinModelPortaliE9PLA9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili61 – 8828Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IEA8. Eukaryota.
ENOG4110M5Q. LUCA.
GeneTreeiENSGT00760000119052.

Family and domain databases

InterProiIPR028816. Caprin.
[Graphical view]
PANTHERiPTHR22922. PTHR22922. 1 hit.

Sequencei

Sequence statusi: Fragment.

E9PLA9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSATSHSGS GSKSSGPPPP SGSSGSEAAA GAGAAAPASQ HPATGTGAVQ
60 70 80 90 100
TEAMKQILGV IDKKLRNLEK KKGKLDDYQE RMNKGERLNQ DQLDAVSKYQ
110 120 130 140 150
EVTNNLEFAK ELQRSFMALS QDIQKTIKKT ARREQLMREE AEQKRLKTVL
160 170 180
ELQYVLDKLG DDEVRTDLKQ GLNGVPILSE EELSLL
Length:186
Mass (Da):20,236
Last modified:April 5, 2011 - v1
Checksum:i47ED687CE441C97F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei186 – 1861Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC090469 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000534825; ENSP00000431373; ENSG00000135387.
UCSCiuc058ago.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC090469 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliE9PLA9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiE9PLA9. 1 interaction.
MINTiMINT-8395047.
STRINGi9606.ENSP00000340329.

Proteomic databases

EPDiE9PLA9.
PaxDbiE9PLA9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000534825; ENSP00000431373; ENSG00000135387.
UCSCiuc058ago.1. human.

Organism-specific databases

HGNCiHGNC:6743. CAPRIN1.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IEA8. Eukaryota.
ENOG4110M5Q. LUCA.
GeneTreeiENSGT00760000119052.

Miscellaneous databases

ChiTaRSiCAPRIN1. human.
NextBioi35503161.

Gene expression databases

BgeeiE9PLA9.
ExpressionAtlasiE9PLA9. baseline and differential.

Family and domain databases

InterProiIPR028816. Caprin.
[Graphical view]
PANTHERiPTHR22922. PTHR22922. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
    Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
    Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  4. "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
    Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.
    Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  5. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
  6. "N-terminome analysis of the human mitochondrial proteome."
    Vaca Jacome A.S., Rabilloud T., Schaeffer-Reiss C., Rompais M., Ayoub D., Lane L., Bairoch A., Van Dorsselaer A., Carapito C.
    Proteomics 15:2519-2524(2015) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiE9PLA9_HUMAN
AccessioniPrimary (citable) accession number: E9PLA9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: March 16, 2016
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.