E9PF36 (E9PF36_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Vacuolar protein sorting-associated protein 41 homolog Ensembl ENSP00000379297

Gene names

Name:

VPS41 Ensembl ENSP00000379297

Organism

Homo sapiens (Human) [Reference proteome] Ensembl ENSP00000379297

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	829 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000379297

Ontologies

Keywords
Domain	Zinc-finger RuleBase RU000353
Ligand	Metal-binding Zinc
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	intracellular protein transport Inferred from electronic annotation. Source: InterPro vesicle-mediated transport Inferred from electronic annotation. Source: InterPro
Molecular_function	zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E9PF36 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: 6F1E1E9EAA2859B4	FASTA	829	95,924
	10 20 30 40 50 60 MAEAEEQETG SLEESTDESE EEESEEEPKL KYERLSNGVT EILQKDAASC MTVHDKFLAL 70 80 90 100 110 120 GTHYGKVYLL DVQGNITQKF DVVQVFGLYS GEEFHETFDC PIKIIAVHPH FVRSSCKQFV 130 140 150 160 170 180 TGGKKLLLFE RSWMNRWKSA VLHEGEGNIR SVKWRGHLIA WANNMGVKIF DIISKQRITN 190 200 210 220 230 240 VPRDDISLRP DMYPCSLCWK DNVTLIIGWG TSVKVCSVKE RHASEMRDLP SRYVEIVSQF 250 260 270 280 290 300 ETEFYISGLA PLCDQLVVLS YVKEISEKTE REYCARPRLD IIQPLSETCE EISSDALTVR 310 320 330 340 350 360 GFQENECRDY HLEYSEGESL FYIVSPRDVV VAKERDQDDH IDWLLEKKKY EEALMAAEIS 370 380 390 400 410 420 QKNIKRHKIL DIGLAYINHL VERGDYDIAA RKCQKILGKN AALWEYEVYK FKEIGQLKAI 430 440 450 460 470 480 SPYLPRGDPV LKPLIYEMIL HEFLESDYEG FATLIREWPG DLYNNSVIVQ AVRDHLKKDS 490 500 510 520 530 540 QNKTLLKTLA ELYTYDKNYG NALEIYLTLR HKDVFQLIHK HNLFSSIKDK IVLLMDFDSE 550 560 570 580 590 600 KAVDMLLDNE DKISIKKVVE ELEDRPELQH VYLHKLFKRD HHKGQRYHEK QISLYAEYDR 610 620 630 640 650 660 PNLLPFLRDS THCPLEKALE ICQQRNFVEE TVYLLSRMGN SRSALKMIME ELHDVDKAIE 670 680 690 700 710 720 FAKEQDDGEL WEDLILYSID KPPFITGLLN NIGTHVDPIL LIHRIKEGME IPNLRDSLVK 730 740 750 760 770 780 ILQDYNLQIL LREGCKKILV ADSLSLLKKM HRTQMKGVLV DEENICESCL SPILPSDAAK 790 800 810 820 PFSVVVFHCR HMFHKECLPM PSMNSAAQFC NICSAKNRGP GSAILEMKK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The DNA sequence of human chromosome 7." Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L. , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K. Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC004850 Genomic DNA. No translation available. AC005247 Genomic DNA. No translation available. AC011292 Genomic DNA. No translation available.
IPI	IPI00081851.
RefSeq	NP_542198.2. NM_080631.3.
UniGene	Hs.592184.
3D structure databases
ProteinModelPortal	E9PF36.
ModBase	Search...
Proteomic databases
PRIDE	E9PF36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000395969; ENSP00000379297; ENSG00000006715.
GeneID	27072.
KEGG	hsa:27072.
UCSC	uc003tgz.3. human.
Organism-specific databases
CTD	27072.
HGNC	HGNC:12713. VPS41.
GenAtlas	Search...
Gene expression databases
ArrayExpress	E9PF36.
Bgee	E9PF36.
Family and domain databases
Gene3D	1.25.40.10. 1 hit. 3.30.40.10. 1 hit.
InterPro	IPR000547. Clathrin_H-chain/VPS_repeat. IPR011990. TPR-like_helical. IPR016902. VPS41. IPR017986. WD40_repeat_dom. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. [Graphical view]
Pfam	PF00637. Clathrin. 1 hit. [Graphical view]
PIRSF	PIRSF028921. VPS41. 1 hit.
SMART	SM00299. CLH. 1 hit. SM00184. RING. 1 hit. [Graphical view]
SUPFAM	SSF50978. WD40_like. 1 hit.
PROSITE	PS50089. ZF_RING_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	VPS41. human.
GenomeRNAi	27072.
NextBio	49663.

Entry information

Entry name

E9PF36_HUMAN

Accession

Primary (citable) accession number: E9PF36

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.