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E9PDF2 (E9PDF2_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:OGDH Ensembl ENSP00000388183
OrganismHomo sapiens (Human) [Reference proteome] Ensembl ENSP00000388183
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1034 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000388183

Sequences

Sequence LengthMass (Da)Tools
E9PDF2 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 2AC4BD2DE7077487

FASTA1,034117,244
        10         20         30         40         50         60 
MFHLRTCAAK LRPLTASQTV KTFSQNRPAA ARTFQQIRCY SAPVAAEPFL SGTSSNYVEE 

        70         80         90        100        110        120 
MYCAWLENPK SVHKSWDIFF RNTNAGAPPG TAYQSPLPLS RGSLAAVAHA QSLVEAQPNV 

       130        140        150        160        170        180 
DKLVEDHLAV QSLIRAYQVR GHHIAKLDPL GISCVNFDDA PVTVSSNVDL AVFKERLRML 

       190        200        210        220        230        240 
TVGGFYGLDE SDLDKVFHLP TTTFIGGQES ALPLREIIRR LEMAYCQHIG VEFMFINDLE 

       250        260        270        280        290        300 
QCQWIRQKFE TPGIMQFTNE EKRTLLARLV RSTRFEEFLQ RKWSSEKRFG LEGCEVLIPA 

       310        320        330        340        350        360 
LKTIIDKSSE NGVDYVIMGM PHRGRLNVLA NVIRKELEQI FCQFDSKLEA ADEGSGDVKY 

       370        380        390        400        410        420 
HLGMYHRRIN RVTDRNITLS LVANPSHLEA ADPVVMGKTK AEQFYCGDTE GKKVMSILLH 

       430        440        450        460        470        480 
GDAAFAGQGI VYETFHLSDL PSYTTHGTVH VVVNNQIGFT TDPRMARSSP YPTDVARVVN 

       490        500        510        520        530        540 
APIFHVNSDD PEAVMYVCKV AAEWRSTFHK DVVVDLVCYR RNGHNEMDEP MFTQPLMYKQ 

       550        560        570        580        590        600 
IRKQKPVLQK YAELLVSQGV VNQPEYEEEI SKYDKICEEA FARSKDEKIL HIKHWLDSPW 

       610        620        630        640        650        660 
PGFFTLDGQP RSMSCPSTGL TEDILTHIGN VASSVPVENF TIHGGLSRIL KTRGEMVKNR 

       670        680        690        700        710        720 
TVDWALAEYM AFGSLLKEGI HIRLSGQDVE RGTFSHRHHV LHDQNVDKRT CIPMNHLWPN 

       730        740        750        760        770        780 
QAPYTVCNSS LSEYGVLGFE LGFAMASPNA LVLWEAQFGD FHNTAQCIID QFICPGQAKW 

       790        800        810        820        830        840 
VRQNGIVLLL PHGMEGMGPE HSSARPERFL QMCNDDPDVL PDLKEANFDI NQLYDCNWVV 

       850        860        870        880        890        900 
VNCSTPGNFF HVLRRQILLP FRKPLIIFTP KSLLRHPEAR SSFDEMLPGT HFQRVIPEDG 

       910        920        930        940        950        960 
PAAQNPENVK RLLFCTGKVY YDLTRERKAR DMVGQVAITR IEQLSPFPFD LLLKEVQKYP 

       970        980        990       1000       1010       1020 
NAELAWCQEE HKNQGYYDYV KPRLRTTISR AKPVWYAGRD PAAAPATGNK KTHLTELQRL 

      1030 
LDTAFDLDVF KNFS 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence of human chromosome 7."
Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L. expand/collapse author list , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC004859 Genomic DNA. No translation available.
AC011894 Genomic DNA. No translation available.
RefSeqXP_005249818.1. XM_005249761.2.
UniGeneHs.488181.

3D structure databases

ProteinModelPortalE9PDF2.
SMRE9PDF2. Positions 130-1025.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEE9PDF2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000447398; ENSP00000388183; ENSG00000105953.
GeneID4967.
KEGGhsa:4967.
UCSCuc003tlp.3. human.

Organism-specific databases

CTD4967.
HGNCHGNC:8124. OGDH.
GenAtlasSearch...

Phylogenomic databases

KOK00164.

Gene expression databases

ArrayExpressE9PDF2.
BgeeE9PDF2.

Family and domain databases

InterProIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Other

ChiTaRSOGDH. human.
GenomeRNAi4967.
NextBio35501634.

Entry information

Entry nameE9PDF2_HUMAN
AccessionPrimary (citable) accession number: E9PDF2
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.