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Protein
Submitted name:

Dihydropyrimidinase-related protein 1

Gene

CRMP1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Dihydropyrimidinase-related protein 1Imported
Gene namesi
Name:CRMP1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 4

Organism-specific databases

HGNCiHGNC:2365. CRMP1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiE9PD68.
PaxDbiE9PD68.
PRIDEiE9PD68.

Expressioni

Gene expression databases

BgeeiE9PD68.
ExpressionAtlasiE9PD68. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000321606.

Structurei

3D structure databases

ProteinModelPortaliE9PD68.
SMRiE9PD68. Positions 13-488.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini62 – 451390Amidohydro-relInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2584. Eukaryota.
COG0044. LUCA.
GeneTreeiENSGT00760000119241.

Family and domain databases

Gene3Di2.30.40.10. 2 hits.
InterProiIPR006680. Amidohydro-rel.
IPR030624. CRMP1.
IPR011778. Hydantoinase/dihydroPyrase.
IPR011059. Metal-dep_hydrolase_composite.
IPR032466. Metal_Hydrolase.
[Graphical view]
PANTHERiPTHR11647:SF54. PTHR11647:SF54. 1 hit.
PfamiPF01979. Amidohydro_1. 1 hit.
[Graphical view]
SUPFAMiSSF51338. SSF51338. 2 hits.
SSF51556. SSF51556. 1 hit.
TIGRFAMsiTIGR02033. D-hydantoinase. 1 hit.

Sequencei

Sequence statusi: Complete.

E9PD68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKMNNEVVD KSDRLLIKGG RIINDDQSLY ADVYLEDGLI KQIGENLIVP
60 70 80 90 100
GGVKTIEANG RMVIPGGIDV NTYLQKPSQG MTAADDFFQG TRAALVGGTT
110 120 130 140 150
MIIDHVVPEP GSSLLTSFEK WHEAADTKSC CDYSLHVDIT SWYDGVREEL
160 170 180 190 200
EVLVQDKGVN SFQVYMAYKD VYQMSDSQLY EAFTFLKGLG AVILVHAENG
210 220 230 240 250
DLIAQEQKRI LEMGITGPEG HALSRPEELE AEAVFRAITI AGRINCPVYI
260 270 280 290 300
TKVMSKSAAD IIALARKKGP LVFGEPIAAS LGTDGTHYWS KNWAKAAAFV
310 320 330 340 350
TSPPLSPDPT TPDYLTSLLA CGDLQVTGSG HCPYSTAQKA VGKDNFTLIP
360 370 380 390 400
EGVNGIEERM TVVWDKAVAT GKMDENQFVA VTSTNAAKIF NLYPRKGRIA
410 420 430 440 450
VGSDADVVIW DPDKLKTITA KSHKSAVEYN IFEGMECHGS PLVVISQGKI
460 470 480 490 500
VFEDGNINVN KGMGRFIPRK AFPEHLYQRV KIRNKVFGLQ GVSRGMYDGP
510 520 530 540 550
VYEVPATPKY ATPAPSAKSS PSKHQPPPIR NLHQSNFSLS GAQIDDNNPR
560 570
RTGHRIVAPP GGRSNITSLG
Length:570
Mass (Da):62,030
Last modified:April 5, 2011 - v1
Checksum:i67EA5570D6721353
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC105915 Genomic DNA. No translation available.
RefSeqiNP_001275590.1. NM_001288661.1.
UniGeneiHs.135270.

Genome annotation databases

EnsembliENST00000512574; ENSP00000425742; ENSG00000072832.
GeneIDi1400.
UCSCiuc003gir.5. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC105915 Genomic DNA. No translation available.
RefSeqiNP_001275590.1. NM_001288661.1.
UniGeneiHs.135270.

3D structure databases

ProteinModelPortaliE9PD68.
SMRiE9PD68. Positions 13-488.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000321606.

Proteomic databases

EPDiE9PD68.
PaxDbiE9PD68.
PRIDEiE9PD68.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000512574; ENSP00000425742; ENSG00000072832.
GeneIDi1400.
UCSCiuc003gir.5. human.

Organism-specific databases

CTDi1400.
HGNCiHGNC:2365. CRMP1.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2584. Eukaryota.
COG0044. LUCA.
GeneTreeiENSGT00760000119241.

Miscellaneous databases

ChiTaRSiCRMP1. human.
GenomeRNAii1400.
NextBioi35501603.

Gene expression databases

BgeeiE9PD68.
ExpressionAtlasiE9PD68. baseline and differential.

Family and domain databases

Gene3Di2.30.40.10. 2 hits.
InterProiIPR006680. Amidohydro-rel.
IPR030624. CRMP1.
IPR011778. Hydantoinase/dihydroPyrase.
IPR011059. Metal-dep_hydrolase_composite.
IPR032466. Metal_Hydrolase.
[Graphical view]
PANTHERiPTHR11647:SF54. PTHR11647:SF54. 1 hit.
PfamiPF01979. Amidohydro_1. 1 hit.
[Graphical view]
SUPFAMiSSF51338. SSF51338. 2 hits.
SSF51556. SSF51556. 1 hit.
TIGRFAMsiTIGR02033. D-hydantoinase. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Generation and annotation of the DNA sequences of human chromosomes 2 and 4."
    Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H.
    , Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K., McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C., Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S., Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H., Wilson R.K.
    Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiE9PD68_HUMAN
AccessioniPrimary (citable) accession number: E9PD68
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: April 13, 2016
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.