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Protein
Submitted name:

CKLF-like MARVEL transmembrane domain-containing protein 1

Gene

CMTM1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
CKLF-like MARVEL transmembrane domain-containing protein 1Imported
Gene namesi
Name:CMTM1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 16

Organism-specific databases

HGNCiHGNC:19172. CMTM1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiE9PAX0.
ExpressionAtlasiE9PAX0. baseline.
GenevisibleiE9PAX0. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000368814.

Structurei

3D structure databases

ProteinModelPortaliE9PAX0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00520000055675.

Family and domain databases

InterProiIPR008253. Marvel.
[Graphical view]
PROSITEiPS51225. MARVEL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9PAX0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPEHAKPES SEAPSGNLKQ PETAAALASS GSVVSSVPKA QRNISAKTAP
60 70 80 90 100
RKHPAVSIRS AQSAAAARPQ GSEGTAPSRK ATTRPPPKPT LPPPTPSAHT
110 120 130 140 150
ESKLLNEMAI KERVEGRAKV PYKFRDSLKR FSFSPTGMLK ILRLSLILGA
160 170 180 190 200
LACFIITQAN ESFITITSLE ICIVVFFILI YVLTLHHLLT YLHWPLLDLT
210 220 230
NSIITAVFLS VVAILAMQEK KRRHLLYVGG R
Length:231
Mass (Da):25,121
Last modified:April 5, 2011 - v1
Checksum:i7A47DB60FB361846
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010542 Genomic DNA. No translation available.
RefSeqiNP_851785.2. NM_181268.2.
UniGeneiHs.15159.
Hs.698621.
Hs.722591.

Genome annotation databases

EnsembliENST00000328020; ENSP00000330061; ENSG00000089505.
GeneIDi113540.
UCSCiuc002epn.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010542 Genomic DNA. No translation available.
RefSeqiNP_851785.2. NM_181268.2.
UniGeneiHs.15159.
Hs.698621.
Hs.722591.

3D structure databases

ProteinModelPortaliE9PAX0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000368814.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000328020; ENSP00000330061; ENSG00000089505.
GeneIDi113540.
UCSCiuc002epn.4. human.

Organism-specific databases

CTDi113540.
HGNCiHGNC:19172. CMTM1.
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00520000055675.

Miscellaneous databases

GenomeRNAii113540.
NextBioi78856.

Gene expression databases

BgeeiE9PAX0.
ExpressionAtlasiE9PAX0. baseline.
GenevisibleiE9PAX0. HS.

Family and domain databases

InterProiIPR008253. Marvel.
[Graphical view]
PROSITEiPS51225. MARVEL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence and analysis of duplication-rich human chromosome 16."
    Martin J., Han C., Gordon L.A., Terry A., Prabhakar S., She X., Xie G., Hellsten U., Chan Y.M., Altherr M., Couronne O., Aerts A., Bajorek E., Black S., Blumer H., Branscomb E., Brown N.C., Bruno W.J.
    , Buckingham J.M., Callen D.F., Campbell C.S., Campbell M.L., Campbell E.W., Caoile C., Challacombe J.F., Chasteen L.A., Chertkov O., Chi H.C., Christensen M., Clark L.M., Cohn J.D., Denys M., Detter J.C., Dickson M., Dimitrijevic-Bussod M., Escobar J., Fawcett J.J., Flowers D., Fotopulos D., Glavina T., Gomez M., Gonzales E., Goodstein D., Goodwin L.A., Grady D.L., Grigoriev I., Groza M., Hammon N., Hawkins T., Haydu L., Hildebrand C.E., Huang W., Israni S., Jett J., Jewett P.B., Kadner K., Kimball H., Kobayashi A., Krawczyk M.-C., Leyba T., Longmire J.L., Lopez F., Lou Y., Lowry S., Ludeman T., Manohar C.F., Mark G.A., McMurray K.L., Meincke L.J., Morgan J., Moyzis R.K., Mundt M.O., Munk A.C., Nandkeshwar R.D., Pitluck S., Pollard M., Predki P., Parson-Quintana B., Ramirez L., Rash S., Retterer J., Ricke D.O., Robinson D.L., Rodriguez A., Salamov A., Saunders E.H., Scott D., Shough T., Stallings R.L., Stalvey M., Sutherland R.D., Tapia R., Tesmer J.G., Thayer N., Thompson L.S., Tice H., Torney D.C., Tran-Gyamfi M., Tsai M., Ulanovsky L.E., Ustaszewska A., Vo N., White P.S., Williams A.L., Wills P.L., Wu J.-R., Wu K., Yang J., DeJong P., Bruce D., Doggett N.A., Deaven L., Schmutz J., Grimwood J., Richardson P., Rokhsar D.S., Eichler E.E., Gilna P., Lucas S.M., Myers R.M., Rubin E.M., Pennacchio L.A.
    Nature 432:988-994(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiE9PAX0_HUMAN
AccessioniPrimary (citable) accession number: E9PAX0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 22, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.