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E9BIE5

- E9BIE5_LEIDB

UniProt

E9BIE5 - E9BIE5_LEIDB

Protein
Submitted name:

DNA ligase, putative

Gene

LDBPK_261330

Organism
Leishmania donovani (strain BPK282A1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase, putativeImported
    Gene namesi
    ORF Names:LDBPK_261330Imported
    OrganismiLeishmania donovani (strain BPK282A1)Imported
    Taxonomic identifieri981087 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
    ProteomesiUP000008980: Chromosome 26

    Structurei

    3D structure databases

    ProteinModelPortaliE9BIE5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000258023.
    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E9BIE5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQTPSNVSPV CMKMAVWRCS HCLQEFEMVV GHFIDGGGVC PHCHSPQKKL    50
    DNVTVRNAQG ELVTKKPQYV KAPRMIHSNY RSVLFANPHW ESLNIQPMLA 100
    QRWELVADEL MKSSNGESGT ASDKHLLLAS PKIDGIRCMI GYNEKLREVQ 150
    FFSRGGIVLE CCHGLVPQLL PLFEKDPTLM LDGELFAPEC NFEQLNGLVR 200
    RLNKKSDPKI MEAQARLLEY FAFDIMYSAQ LSSVSAPFDE RYMLLKKLIP 250
    VCGAKRISNY VHDDTRKKVI RATHGGVATA AAANGQAVKI YHVPAAQVHP 300
    SDMEDVLNEA CSQGFEGVMI RLPKFPYEHG KRSFGLLKYK QMHDAEFKIV 350
    GFVPGEGKFK SALGAFVCTT KDGKHFNTPP KVSCKHRIEL WEHRREYLGK 400
    YLTVQYQELS SQNVPRFPIA KAIRGSEDKR DWL 433
    Length:433
    Mass (Da):48,953
    Last modified:April 5, 2011 - v1
    Checksum:i1B3611F49C7C9522
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FR799613 Genomic DNA. Translation: CBZ35021.1.
    RefSeqiXP_003861720.1. XM_003861672.1.

    Genome annotation databases

    GeneIDi13388966.
    KEGGildo:LDBPK_261330.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FR799613 Genomic DNA. Translation: CBZ35021.1 .
    RefSeqi XP_003861720.1. XM_003861672.1.

    3D structure databases

    ProteinModelPortali E9BIE5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 13388966.
    KEGGi ldo:LDBPK_261330.

    Phylogenomic databases

    HOGENOMi HOG000258023.
    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Whole genome sequencing of Leishmania donovani clinical lines reveals dynamic variation related to drug resistance."
      Downing T., Imamura H., Sanders M., Decuypere S., Hertz-Fowler C., Clark T.G., Rijal S., Sundar S., Quail M.A., De Doncker S., Maes I., Vanaerschot M., Stark O., Schonian G., Dujardin J.C., Berriman M.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BPK282A1Imported.

    Entry informationi

    Entry nameiE9BIE5_LEIDB
    AccessioniPrimary (citable) accession number: E9BIE5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3