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E9BIE5

- E9BIE5_LEIDB

UniProt

E9BIE5 - E9BIE5_LEIDB

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Protein
Submitted name:

DNA ligase, putative

Gene

LDBPK_261330

Organism
Leishmania donovani (strain BPK282A1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, putativeImported
Gene namesi
ORF Names:LDBPK_261330Imported
OrganismiLeishmania donovani (strain BPK282A1)Imported
Taxonomic identifieri981087 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
ProteomesiUP000008980: Chromosome 26

Structurei

3D structure databases

ProteinModelPortaliE9BIE5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000258023.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E9BIE5-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQTPSNVSPV CMKMAVWRCS HCLQEFEMVV GHFIDGGGVC PHCHSPQKKL
60 70 80 90 100
DNVTVRNAQG ELVTKKPQYV KAPRMIHSNY RSVLFANPHW ESLNIQPMLA
110 120 130 140 150
QRWELVADEL MKSSNGESGT ASDKHLLLAS PKIDGIRCMI GYNEKLREVQ
160 170 180 190 200
FFSRGGIVLE CCHGLVPQLL PLFEKDPTLM LDGELFAPEC NFEQLNGLVR
210 220 230 240 250
RLNKKSDPKI MEAQARLLEY FAFDIMYSAQ LSSVSAPFDE RYMLLKKLIP
260 270 280 290 300
VCGAKRISNY VHDDTRKKVI RATHGGVATA AAANGQAVKI YHVPAAQVHP
310 320 330 340 350
SDMEDVLNEA CSQGFEGVMI RLPKFPYEHG KRSFGLLKYK QMHDAEFKIV
360 370 380 390 400
GFVPGEGKFK SALGAFVCTT KDGKHFNTPP KVSCKHRIEL WEHRREYLGK
410 420 430
YLTVQYQELS SQNVPRFPIA KAIRGSEDKR DWL
Length:433
Mass (Da):48,953
Last modified:April 5, 2011 - v1
Checksum:i1B3611F49C7C9522
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FR799613 Genomic DNA. Translation: CBZ35021.1.
RefSeqiXP_003861720.1. XM_003861672.1.

Genome annotation databases

GeneIDi13388966.
KEGGildo:LDBPK_261330.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FR799613 Genomic DNA. Translation: CBZ35021.1 .
RefSeqi XP_003861720.1. XM_003861672.1.

3D structure databases

ProteinModelPortali E9BIE5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 13388966.
KEGGi ldo:LDBPK_261330.

Phylogenomic databases

HOGENOMi HOG000258023.
KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Whole genome sequencing of Leishmania donovani clinical lines reveals dynamic variation related to drug resistance."
    Downing T., Imamura H., Sanders M., Decuypere S., Hertz-Fowler C., Clark T.G., Rijal S., Sundar S., Quail M.A., De Doncker S., Maes I., Vanaerschot M., Stark O., Schonian G., Dujardin J.C., Berriman M.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BPK282A1Imported.

Entry informationi

Entry nameiE9BIE5_LEIDB
AccessioniPrimary (citable) accession number: E9BIE5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 1, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3