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E8YVP3 (E8YVP3_9BURK) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.1.42 EMBL ADX57946.1
Gene names
ORF Names:BC1001_4557 EMBL ADX57946.1
OrganismBurkholderia sp. CCGE1001 [Complete proteome] EMBL ADX57946.1
Taxonomic identifier640510 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length742 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region133 – 1408Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3511Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5491Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5531Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1461Substrate By similarity PIRSR PIRSR009407-2
Binding site5481Substrate By similarity PIRSR PIRSR009407-2
Site2561Critical for catalysis By similarity
Site4211Critical for catalysis By similarity

Sequences

Sequence LengthMass (Da)Tools
E8YVP3 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: A171ADEEF9833659

FASTA74279,907
        10         20         30         40         50         60 
MSTPPKIIYT LTDEAPALAT YSLLPIVKAF TRSSGVNVET RDISLAGRII AAFPDYLSPE 

        70         80         90        100        110        120 
QKGSDDLAEL GGLTTRPEAN IIKLPNISAS VPQLKAAITE LRDQGYKLPP YPDVATTDTE 

       130        140        150        160        170        180 
KDVKARYDKI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWTADS KSHVAHMSGG 

       190        200        210        220        230        240 
DFYGSEKSAL IAAAGAVKIE LTAADGTKTV LKEKTPVQAG EVIDASVLSK NALRSFIEKE 

       250        260        270        280        290        300 
ISDAKANGVL FSVHLKATMM KVSDPIIFGH VVSVFYKDVL TKHADALAQA GFNPNNGIGD 

       310        320        330        340        350        360 
LYARLKDLPA ETAAQIEADI KAQYEQRPQL AMVNSDKGIT SLHVPSDVIV DASMPAMIRE 

       370        380        390        400        410        420 
SGKMWGADGA LHDAKAVIPD RCYAGVYQAV IEDCKKNGAF DPVTMGTVPN VGLMAQAAEE 

       430        440        450        460        470        480 
YGSHDKTFQI PANGVVRVTD ASGAVLIEQP VEAGDIWRMC QTKDAPVQDW VKLAVNRARA 

       490        500        510        520        530        540 
TNTPAVFWLD AARAHDAQII KKVEQYLKDH DTNGLDIRIM TPVEATKFSL ERIRAGKDTI 

       550        560        570        580        590        600 
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGMFE TGAGGSAPKH VQQLVEEGFL 

       610        620        630        640        650        660 
RWDSLGEFLA LAASLEHLSS AYHNPKAQVL AKTLDQATGK FLDNDKSPAR KVGGLDNRGS 

       670        680        690        700        710        720 
HFYLAMYWAE ALAEQTEDAA LQAQFAGVAK AMAANEAKIL EELRAAQGKP VDIGGYYRPN 

       730        740 
VELTSKAMRP SATLNQIVDS IA 

« Hide

References

[1]"Complete sequence of chromosome2 of Burkholderia sp. CCGE1001."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Martinez-Romero E. expand/collapse author list , Rogel M.A., Auchtung J., Tiedje J., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CCGE1001 EMBL ADX57946.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002520 Genomic DNA. Translation: ADX57946.1.
RefSeqYP_004231006.1. NC_015137.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADX57946; ADX57946; BC1001_4557.
GeneID10226149.
KEGGbug:BC1001_4557.
PATRIC46902192. VBIBurSp1058_4767.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.

Enzyme and pathway databases

BioCycBSP640510:GI28-4626-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE8YVP3_9BURK
AccessionPrimary (citable) accession number: E8YVP3
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: January 22, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)