E8YQJ6 (E8YQJ6_9BURK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADX57061.1

Gene names

ORF Names:

BC1001_3648 EMBL ADX57061.1

Organism

Burkholderia sp. CCGE1001 EMBL ADX57061.1

Taxonomic identifier

640510 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia

Protein attributes

Sequence length	568 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADX57061.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E8YQJ6 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: 726DC2990C6D2114	FASTA	568	63,178
	10 20 30 40 50 60 MKRFAALYAA LDATTSTHDK LEALTSYFSV ADPEDAAWAS YFLAGGKPRQ SVPTRLLTEF 70 80 90 100 110 120 ARERAGLPAW LFEESYHAVG DLAETIAHIL PPAQRTSELG LTQWIEQRVL TLRGLAPEAL 130 140 150 160 170 180 RTRLFSYWDE LDWSGRFLLT KLIGGGFRVG VARQLVVRAL AEVAGVDHKR IAQRMVGWTD 190 200 210 220 230 240 SRQKPDAARY LRLIAPDVSE AAARDGADGA DGAQPARERH DSDLGLPYPF FLAHPLQADP 250 260 270 280 290 300 QTLGDPSRWL IEWKWDGIRA QLVKRAGRVW LWSRGEDLIT DRFPEVVALG EALPDGFVID 310 320 330 340 350 360 GEILAWEPGG AMPLPFARLQ PRIARKTLSK KILADSPAAL LAYDLLEAHG EDLRMTPLAD 370 380 390 400 410 420 RRARLDTLAA SLGDSLAGDL LRVSPLVCGT DWQALAALRE ESRARGVEGL MLKERESLYG 430 440 450 460 470 480 VGRTKASGTW WKWKIDPYAV DAVLVYAQRG HGRRASLYTD FTFAVWDEAN GVRTLVPFAK 490 500 510 520 530 540 AYSGLTDEEM RQVDAIVRKT TIEKFGPVRS VTPTLVFEIG FEGIQASTRH KSGVAVRFPR 550 560 MLRWRTDKHI DDADTLAMLK GFIDDRAA

References

[1]

"Complete sequence of chromosome2 of Burkholderia sp. CCGE1001." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Martinez-Romero E. , Rogel M.A., Auchtung J., Tiedje J., Woyke T. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: CCGE1001 EMBL ADX57061.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002520 Genomic DNA. Translation: ADX57061.1.
RefSeq	YP_004230121.1. NC_015137.1.
3D structure databases
ProteinModelPortal	E8YQJ6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADX57061; ADX57061; BC1001_3648.
GeneID	10225239.
KEGG	bug:BC1001_3648.
PATRIC	46900278. VBIBurSp1058_3818.
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	BSP640510:GI28-46-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E8YQJ6_9BURK

Accession

Primary (citable) accession number: E8YQJ6

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)