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E8YQJ6

- E8YQJ6_9BURK

UniProt

E8YQJ6 - E8YQJ6_9BURK

Protein
Submitted name:

ATP dependent DNA ligase

Gene

BC1001_3648

Organism
Burkholderia sp. CCGE1001
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBSP640510:GI28-3716-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    ORF Names:BC1001_3648Imported
    OrganismiBurkholderia sp. CCGE1001Imported
    Taxonomic identifieri640510 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
    ProteomesiUP000007095: Chromosome 2

    Structurei

    3D structure databases

    ProteinModelPortaliE8YQJ6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E8YQJ6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRFAALYAA LDATTSTHDK LEALTSYFSV ADPEDAAWAS YFLAGGKPRQ    50
    SVPTRLLTEF ARERAGLPAW LFEESYHAVG DLAETIAHIL PPAQRTSELG 100
    LTQWIEQRVL TLRGLAPEAL RTRLFSYWDE LDWSGRFLLT KLIGGGFRVG 150
    VARQLVVRAL AEVAGVDHKR IAQRMVGWTD SRQKPDAARY LRLIAPDVSE 200
    AAARDGADGA DGAQPARERH DSDLGLPYPF FLAHPLQADP QTLGDPSRWL 250
    IEWKWDGIRA QLVKRAGRVW LWSRGEDLIT DRFPEVVALG EALPDGFVID 300
    GEILAWEPGG AMPLPFARLQ PRIARKTLSK KILADSPAAL LAYDLLEAHG 350
    EDLRMTPLAD RRARLDTLAA SLGDSLAGDL LRVSPLVCGT DWQALAALRE 400
    ESRARGVEGL MLKERESLYG VGRTKASGTW WKWKIDPYAV DAVLVYAQRG 450
    HGRRASLYTD FTFAVWDEAN GVRTLVPFAK AYSGLTDEEM RQVDAIVRKT 500
    TIEKFGPVRS VTPTLVFEIG FEGIQASTRH KSGVAVRFPR MLRWRTDKHI 550
    DDADTLAMLK GFIDDRAA 568
    Length:568
    Mass (Da):63,178
    Last modified:April 5, 2011 - v1
    Checksum:i726DC2990C6D2114
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002520 Genomic DNA. Translation: ADX57061.1.
    RefSeqiWP_013590171.1. NC_015137.1.
    YP_004230121.1. NC_015137.1.

    Genome annotation databases

    EnsemblBacteriaiADX57061; ADX57061; BC1001_3648.
    GeneIDi10225239.
    KEGGibug:BC1001_3648.
    PATRICi46900278. VBIBurSp1058_3818.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002520 Genomic DNA. Translation: ADX57061.1 .
    RefSeqi WP_013590171.1. NC_015137.1.
    YP_004230121.1. NC_015137.1.

    3D structure databases

    ProteinModelPortali E8YQJ6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADX57061 ; ADX57061 ; BC1001_3648 .
    GeneIDi 10225239.
    KEGGi bug:BC1001_3648.
    PATRICi 46900278. VBIBurSp1058_3818.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci BSP640510:GI28-3716-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CCGE1001Imported.

    Entry informationi

    Entry nameiE8YQJ6_9BURK
    AccessioniPrimary (citable) accession number: E8YQJ6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3