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E8YQJ6 (E8YQJ6_9BURK) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:BC1001_3648 EMBL ADX57061.1
OrganismBurkholderia sp. CCGE1001 [Complete proteome] EMBL ADX57061.1
Taxonomic identifier640510 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length568 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E8YQJ6 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 726DC2990C6D2114

FASTA56863,178
        10         20         30         40         50         60 
MKRFAALYAA LDATTSTHDK LEALTSYFSV ADPEDAAWAS YFLAGGKPRQ SVPTRLLTEF 

        70         80         90        100        110        120 
ARERAGLPAW LFEESYHAVG DLAETIAHIL PPAQRTSELG LTQWIEQRVL TLRGLAPEAL 

       130        140        150        160        170        180 
RTRLFSYWDE LDWSGRFLLT KLIGGGFRVG VARQLVVRAL AEVAGVDHKR IAQRMVGWTD 

       190        200        210        220        230        240 
SRQKPDAARY LRLIAPDVSE AAARDGADGA DGAQPARERH DSDLGLPYPF FLAHPLQADP 

       250        260        270        280        290        300 
QTLGDPSRWL IEWKWDGIRA QLVKRAGRVW LWSRGEDLIT DRFPEVVALG EALPDGFVID 

       310        320        330        340        350        360 
GEILAWEPGG AMPLPFARLQ PRIARKTLSK KILADSPAAL LAYDLLEAHG EDLRMTPLAD 

       370        380        390        400        410        420 
RRARLDTLAA SLGDSLAGDL LRVSPLVCGT DWQALAALRE ESRARGVEGL MLKERESLYG 

       430        440        450        460        470        480 
VGRTKASGTW WKWKIDPYAV DAVLVYAQRG HGRRASLYTD FTFAVWDEAN GVRTLVPFAK 

       490        500        510        520        530        540 
AYSGLTDEEM RQVDAIVRKT TIEKFGPVRS VTPTLVFEIG FEGIQASTRH KSGVAVRFPR 

       550        560 
MLRWRTDKHI DDADTLAMLK GFIDDRAA 

« Hide

References

[1]"Complete sequence of chromosome2 of Burkholderia sp. CCGE1001."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Martinez-Romero E. expand/collapse author list , Rogel M.A., Auchtung J., Tiedje J., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CCGE1001 EMBL ADX57061.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002520 Genomic DNA. Translation: ADX57061.1.
RefSeqYP_004230121.1. NC_015137.1.

3D structure databases

ProteinModelPortalE8YQJ6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADX57061; ADX57061; BC1001_3648.
GeneID10225239.
KEGGbug:BC1001_3648.
PATRIC46900278. VBIBurSp1058_3818.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycBSP640510:GI28-3716-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8YQJ6_9BURK
AccessionPrimary (citable) accession number: E8YQJ6
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: January 22, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)