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E8YQ04 (E8YQ04_9BURK) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:BC1001_3606 EMBL ADX57019.1
OrganismBurkholderia sp. CCGE1001 [Complete proteome] EMBL ADX57019.1
Taxonomic identifier640510 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length554 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E8YQ04 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 98BB2D3A24D89A8A

FASTA55463,886
        10         20         30         40         50         60 
MLNDLWYKNA IVYCLSVGSF MDANGDGVGD FKGLLRRLDY LQGLGVTTIW LMPFQPSPGR 

        70         80         90        100        110        120 
DNGYDISDYY NVDPKYGTLG DFSEFTHACR ERGLRVMIDL VVNHTSDQHP WFREARSDPD 

       130        140        150        160        170        180 
SPYRDWYVWS GRQPPNAKDG VVFPGVQKST WTFDKEAKRW YFHRFYEFQP DLNTANPYVQ 

       190        200        210        220        230        240 
AELLKIMGFW IQLGVSGFRM DAVPFVIATK GPQVRKPVEQ YDMLRAFREF LQWRQGDAII 

       250        260        270        280        290        300 
LAEANVLPNT DLEYFGDEGE RLQMMFNFQL NQNTFYTLAT GDTAPLKKAL TATRPRPATA 

       310        320        330        340        350        360 
QWGVFLRNHD ELDLGRLTPE QRAAVFAAFA PDPDMQLYER GIRRRLAPML AGDRRRLELA 

       370        380        390        400        410        420 
YSLMLTLPGT PVFRYGDEIG MGDDLRLPER ECARTPMQWS AEPQGGFTKH PKPPCRVITG 

       430        440        450        460        470        480 
GAYGFERINV AGQRRDPNSL LNWMERMIRM RREVPEISWG DFHVLRASRD DVLALRYDWR 

       490        500        510        520        530        540 
NNSVLCLHNF GAEACTVKFR SGCAEPGQNR LINLLSDDHS EESDDGRHAV VLEPYGYRWY 

       550 
RVGGLDYLLR RSEI 

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References

[1]"Complete sequence of chromosome2 of Burkholderia sp. CCGE1001."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Martinez-Romero E. expand/collapse author list , Rogel M.A., Auchtung J., Tiedje J., Woyke T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CCGE1001 EMBL ADX57019.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002520 Genomic DNA. Translation: ADX57019.1.
RefSeqYP_004230079.1. NC_015137.1.

3D structure databases

ProteinModelPortalE8YQ04.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADX57019; ADX57019; BC1001_3606.
GeneID10225197.
KEGGbug:BC1001_3606.
PATRIC46900189. VBIBurSp1058_3774.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Enzyme and pathway databases

BioCycBSP640510:GI28-3674-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameE8YQ04_9BURK
AccessionPrimary (citable) accession number: E8YQ04
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: January 22, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)